PBX1: Difference between revisions
m fixed CS1 errors: dates & General fixes using AWB (9832) |
Citation bot (talk | contribs) Alter: journal, issue. Formatted dashes. | Use this bot. Report bugs. | Suggested by Boghog | #UCB_webform |
||
(32 intermediate revisions by 16 users not shown) | |||
Line 1: | Line 1: | ||
{{Short description|Protein found in humans}} |
|||
⚫ | |||
{{cs1 config|name-list-style=vanc|display-authors=6}} |
|||
'''Pre-B-cell leukemia transcription factor 1''' is a [[protein]] that in humans is encoded by the ''PBX1'' [[gene]].<ref>{{cite web | title = Entrez Gene: PBX1 Pre-B-cell leukemia homeobox 1| url = |
{{Infobox_gene}}'''Pre-B-cell leukemia transcription factor 1''' is a [[protein]] that in humans is encoded by the ''PBX1'' [[gene]].<ref>{{cite web | title = Entrez Gene: PBX1 Pre-B-cell leukemia homeobox 1| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=5087}}</ref> The homologous protein in Drosophila is known as '''extradenticle''', and causes changes in embryonic development. |
||
<!-- The PBB_Summary template is automatically maintained by Protein Box Bot. See Template:PBB_Controls to Stop updates. --> |
|||
{{PBB_Summary |
|||
| section_title = |
|||
| summary_text = |
|||
}} |
|||
== |
== Function == |
||
Mice studies suggest PBX1 is involved in bone generation and skeletal patterning.<ref>{{Cite web |title=PBX1 PBX homeobox 1 [Homo sapiens (human)] - Gene - NCBI |url=https://www.ncbi.nlm.nih.gov/gene?cmd=retrieve&dopt=default&rn=1&list_uids=5087 |access-date=2023-06-11 |website=www.ncbi.nlm.nih.gov}}</ref> |
|||
PBX1 has been shown to [[Protein-protein interaction|interact]] with [[HOXB1]],<ref name=pmid9482740>{{cite journal |last=Berthelsen |first=J |authorlink= |coauthors=Zappavigna V, Ferretti E, Mavilio F, Blasi F |year=1998|month=Mar |title=The novel homeoprotein Prep1 modulates Pbx-Hox protein cooperativity |journal=EMBO J. |volume=17 |issue=5 |pages=1434–45 |publisher= |location = ENGLAND| issn = 0261-4189| pmid = 9482740 |doi = 10.1093/emboj/17.5.1434 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = |pmc=1170491 }}</ref><ref name=pmid10052460>{{cite journal |last=Piper |first=D E |authorlink= |coauthors=Batchelor A H, Chang C P, Cleary M L, Wolberger C |year=1999|month=Feb |title=Structure of a HoxB1-Pbx1 heterodimer bound to DNA: role of the hexapeptide and a fourth homeodomain helix in complex formation |journal=Cell |volume=96 |issue=4 |pages=587–97 |publisher= |location = UNITED STATES| issn = 0092-8674| pmid = 10052460 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = |doi=10.1016/S0092-8674(00)80662-5 }}</ref> [[MEIS1]]<ref name=pmid10082572>{{cite journal |last=Shen |first=W F |authorlink= |coauthors=Rozenfeld S, Kwong A, Köm ves L G, Lawrence H J, Largman C |year=1999|month=Apr |title=HOXA9 Forms Triple Complexes with PBX2 and MEIS1 in Myeloid Cells |journal=Mol. Cell. Biol. |volume=19 |issue=4 |pages=3051–61 |publisher= |location = UNITED STATES| issn = 0270-7306| pmid = 10082572 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = |pmc=84099 }}</ref><ref name=pmid10523646>{{cite journal |last=Shanmugam |first=K |authorlink= |coauthors=Green N C, Rambaldi I, Saragovi H U, Featherstone M S |year=1999|month=Nov |title=PBX and MEIS as Non-DNA-Binding Partners in Trimeric Complexes with HOX Proteins |journal=Mol. Cell. Biol. |volume=19 |issue=11 |pages=7577–88 |publisher= |location = UNITED STATES| issn = 0270-7306| pmid = 10523646 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = |pmc=84774 }}</ref><ref name=pmid10373562>{{cite journal |last=Jacobs |first=Y |authorlink= |coauthors=Schnabel C A, Cleary M L |year=1999|month=Jul |title=Trimeric Association of Hox and TALE Homeodomain Proteins Mediates Hoxb2 Hindbrain Enhancer Activity |journal=Mol. Cell. Biol. |volume=19 |issue=7 |pages=5134–42 |publisher= |location = UNITED STATES| issn = 0270-7306| pmid = 10373562 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = |pmc=84356 }}</ref> and [[HOXB7]].<ref name=pmid7729685>{{cite journal |last=Chang |first=C P |authorlink= |coauthors=Shen W F, Rozenfeld S, Lawrence H J, Largman C, Cleary M L |year=1995|month=Mar |title=Pbx proteins display hexapeptide-dependent cooperative DNA binding with a subset of Hox proteins |journal=Genes Dev. |volume=9 |issue=6 |pages=663–74 |publisher= |location = UNITED STATES| issn = 0890-9369| pmid = 7729685 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = |doi=10.1101/gad.9.6.663 }}</ref> |
|||
== |
== Interactions == |
||
PBX1 has been shown to [[Protein-protein interaction|interact]] with: |
|||
* [[HOXB1]],<ref name = pmid9482740>{{cite journal | vauthors = Berthelsen J, Zappavigna V, Ferretti E, Mavilio F, Blasi F | title = The novel homeoprotein Prep1 modulates Pbx-Hox protein cooperativity | journal = The EMBO Journal | volume = 17 | issue = 5 | pages = 1434–1445 | date = March 1998 | pmid = 9482740 | pmc = 1170491 | doi = 10.1093/emboj/17.5.1434 }}</ref><ref name = pmid10052460>{{cite journal | vauthors = Piper DE, Batchelor AH, Chang CP, Cleary ML, Wolberger C | title = Structure of a HoxB1-Pbx1 heterodimer bound to DNA: role of the hexapeptide and a fourth homeodomain helix in complex formation | journal = Cell | volume = 96 | issue = 4 | pages = 587–597 | date = February 1999 | pmid = 10052460 | doi = 10.1016/S0092-8674(00)80662-5 | s2cid = 16122785 | doi-access = free }}</ref> |
|||
* [[HOXB7]],<ref name = pmid7729685>{{cite journal | vauthors = Chang CP, Shen WF, Rozenfeld S, Lawrence HJ, Largman C, Cleary ML | title = Pbx proteins display hexapeptide-dependent cooperative DNA binding with a subset of Hox proteins | journal = Genes & Development | volume = 9 | issue = 6 | pages = 663–674 | date = March 1995 | pmid = 7729685 | doi = 10.1101/gad.9.6.663 | doi-access = free }}</ref> |
|||
* [[MEIS1]],<ref name = pmid10082572>{{cite journal | vauthors = Shen WF, Rozenfeld S, Kwong A, Köm ves LG, Lawrence HJ, Largman C | title = HOXA9 forms triple complexes with PBX2 and MEIS1 in myeloid cells | journal = Molecular and Cellular Biology | volume = 19 | issue = 4 | pages = 3051–3061 | date = April 1999 | pmid = 10082572 | pmc = 84099 | doi = 10.1128/MCB.19.4.3051 }}</ref><ref name = pmid10523646>{{cite journal | vauthors = Shanmugam K, Green NC, Rambaldi I, Saragovi HU, Featherstone MS | title = PBX and MEIS as non-DNA-binding partners in trimeric complexes with HOX proteins | journal = Molecular and Cellular Biology | volume = 19 | issue = 11 | pages = 7577–7588 | date = November 1999 | pmid = 10523646 | pmc = 84774 | doi = 10.1128/MCB.19.11.7577 }}</ref><ref name = pmid10373562>{{cite journal | vauthors = Jacobs Y, Schnabel CA, Cleary ML | title = Trimeric association of Hox and TALE homeodomain proteins mediates Hoxb2 hindbrain enhancer activity | journal = Molecular and Cellular Biology | volume = 19 | issue = 7 | pages = 5134–5142 | date = July 1999 | pmid = 10373562 | pmc = 84356 | doi = 10.1128/MCB.19.7.5134 }}</ref> and |
|||
* [[PKNOX1|Prep1]].<ref name = pmid16705164>{{cite journal | vauthors = Zubair M, Ishihara S, Oka S, Okumura K, Morohashi K | title = Two-step regulation of Ad4BP/SF-1 gene transcription during fetal adrenal development: initiation by a Hox-Pbx1-Prep1 complex and maintenance via autoregulation by Ad4BP/SF-1 | journal = Molecular and Cellular Biology | volume = 26 | issue = 11 | pages = 4111–4121 | date = June 2006 | pmid = 16705164 | pmc = 1489093 | doi = 10.1128/MCB.00222-06 }}</ref> |
|||
== Fruit fly homolog == |
|||
The [[Drosophila melanogaster|''Drosophila melangoster'']] gene called ''extradenticle'' encodes a homeodomain protein that is 71% similar to the Pbx1 protein, and is considered homologous to PBX1.<ref name=":0">{{cite journal | vauthors = Rauskolb C, Peifer M, Wieschaus E | title = extradenticle, a regulator of homeotic gene activity, is a homolog of the homeobox-containing human proto-oncogene pbx1 | journal = Cell | volume = 74 | issue = 6 | pages = 1101–1112 | date = September 1993 | pmid = 8104703 | doi = 10.1016/0092-8674(93)90731-5 | s2cid = 44721382 }}</ref> extradenticle is a [[Homeodomain transcription factors|homeodomain transcription factor]]<ref>{{cite journal | vauthors = Aspland SE, White RA | title = Nucleocytoplasmic localisation of extradenticle protein is spatially regulated throughout development in Drosophila | journal = Development | volume = 124 | issue = 3 | pages = 741–747 | date = February 1997 | pmid = 9043089 | doi = 10.1242/dev.124.3.741 }}</ref> expressed during [[embryogenesis]] and is related to morphological changes and development.<ref name=":0" /> |
|||
Reduced levels of extradenticle cause segmental transformations, without affecting the functionality or location of [[Homeotic gene|homeotic]] genes. Complete removal of extradenticle both maternally and zygotically leads to alterations from failure of non-extradenticle protein expression.<ref>{{cite journal | vauthors = Peifer M, Wieschaus E | title = Mutations in the Drosophila gene extradenticle affect the way specific homeo domain proteins regulate segmental identity | journal = Genes & Development | volume = 4 | issue = 7 | pages = 1209–1223 | date = July 1990 | pmid = 1976570 | doi = 10.1101/gad.4.7.1209 | doi-access = free }}</ref> |
|||
A monoclonal antibody study of the expression of extradenticle protein in embryonic development found that it is uniformly distributed, as well as excluded from cell nuclei, until [[gastrulation]]. During the germ band retraction stage of development, extradenticle protein begins to accumulate in the nuclei of cells in a specific pattern. Proximal areas of wing and leg [[imaginal disc]]s have extradenticle present in the nucleus, while distal areas only have it in the cytoplasm.<ref>{{Cite web |title=Nucleocytoplasmic localisation of extradenticle protein is spatially regulated throughout development in Drosophila |url=https://journals.biologists.com/dev/article/124/3/741/39722/Nucleocytoplasmic-localisation-of-extradenticle |access-date=2023-06-06 |website=journals.biologists.com}}</ref> |
|||
== References == |
|||
{{reflist}} |
{{reflist}} |
||
==Further reading== |
== Further reading == |
||
{{refbegin |
{{refbegin|33em}} |
||
*{{cite journal |
* {{cite journal | vauthors = Sanyal M, Tung JW, Karsunky H, Zeng H, Selleri L, Weissman IL, Herzenberg LA, Cleary ML | display-authors = 6 | title = B-cell development fails in the absence of the Pbx1 proto-oncogene | journal = Blood | volume = 109 | issue = 10 | pages = 4191–4199 | date = May 2007 | pmid = 17244677 | pmc = 1885499 | doi = 10.1182/blood-2006-10-054213 }} |
||
* {{cite journal | vauthors = Hui H, Perfetti R | title = Pancreas duodenum homeobox-1 regulates pancreas development during embryogenesis and islet cell function in adulthood | journal = European Journal of Endocrinology | volume = 146 | issue = 2 | pages = 129–141 | date = February 2002 | pmid = 11834421 | doi = 10.1530/eje.0.1460129 | doi-access = free }} |
|||
{{PBB_Further_reading |
|||
* {{cite journal | vauthors = Hunger SP, Galili N, Carroll AJ, Crist WM, Link MP, Cleary ML | title = The t(1;19)(q23;p13) results in consistent fusion of E2A and PBX1 coding sequences in acute lymphoblastic leukemias | journal = Blood | volume = 77 | issue = 4 | pages = 687–693 | date = February 1991 | pmid = 1671560 | doi = 10.1182/blood.V77.4.687.687 | doi-access = free }} |
|||
| citations = |
|||
*{{cite journal |
* {{cite journal | vauthors = Monica K, Galili N, Nourse J, Saltman D, Cleary ML | title = PBX2 and PBX3, new homeobox genes with extensive homology to the human proto-oncogene PBX1 | journal = Molecular and Cellular Biology | volume = 11 | issue = 12 | pages = 6149–6157 | date = December 1991 | pmid = 1682799 | pmc = 361792 | doi = 10.1128/mcb.11.12.6149 }} |
||
*{{cite journal |
* {{cite journal | vauthors = Nourse J, Mellentin JD, Galili N, Wilkinson J, Stanbridge E, Smith SD, Cleary ML | title = Chromosomal translocation t(1;19) results in synthesis of a homeobox fusion mRNA that codes for a potential chimeric transcription factor | journal = Cell | volume = 60 | issue = 4 | pages = 535–545 | date = February 1990 | pmid = 1967982 | doi = 10.1016/0092-8674(90)90657-Z | s2cid = 7975269 | doi-access = free }} |
||
*{{cite journal |
* {{cite journal | vauthors = Kamps MP, Murre C, Sun XH, Baltimore D | title = A new homeobox gene contributes the DNA binding domain of the t(1;19) translocation protein in pre-B ALL | journal = Cell | volume = 60 | issue = 4 | pages = 547–555 | date = February 1990 | pmid = 1967983 | doi = 10.1016/0092-8674(90)90658-2 | s2cid = 39661371 }} |
||
*{{cite journal |
* {{cite journal | vauthors = Lu Q, Wright DD, Kamps MP | title = Fusion with E2A converts the Pbx1 homeodomain protein into a constitutive transcriptional activator in human leukemias carrying the t(1;19) translocation | journal = Molecular and Cellular Biology | volume = 14 | issue = 6 | pages = 3938–3948 | date = June 1994 | pmid = 7910944 | pmc = 358760 | doi = 10.1128/mcb.14.6.3938 }} |
||
*{{cite journal |
* {{cite journal | vauthors = Van Dijk MA, Voorhoeve PM, Murre C | title = Pbx1 is converted into a transcriptional activator upon acquiring the N-terminal region of E2A in pre-B-cell acute lymphoblastoid leukemia | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 90 | issue = 13 | pages = 6061–6065 | date = July 1993 | pmid = 8327485 | pmc = 46867 | doi = 10.1073/pnas.90.13.6061 | doi-access = free | bibcode = 1993PNAS...90.6061D }} |
||
*{{cite journal |
* {{cite journal | vauthors = Lu Q, Kamps MP | title = Structural determinants within Pbx1 that mediate cooperative DNA binding with pentapeptide-containing Hox proteins: proposal for a model of a Pbx1-Hox-DNA complex | journal = Molecular and Cellular Biology | volume = 16 | issue = 4 | pages = 1632–1640 | date = April 1996 | pmid = 8657138 | pmc = 231149 | doi = 10.1128/mcb.16.4.1632 }} |
||
*{{cite journal |
* {{cite journal | vauthors = Berthelsen J, Zappavigna V, Mavilio F, Blasi F | title = Prep1, a novel functional partner of Pbx proteins | journal = The EMBO Journal | volume = 17 | issue = 5 | pages = 1423–1433 | date = March 1998 | pmid = 9482739 | pmc = 1170490 | doi = 10.1093/emboj/17.5.1423 }} |
||
*{{cite journal |
* {{cite journal | vauthors = Berthelsen J, Zappavigna V, Ferretti E, Mavilio F, Blasi F | title = The novel homeoprotein Prep1 modulates Pbx-Hox protein cooperativity | journal = The EMBO Journal | volume = 17 | issue = 5 | pages = 1434–1445 | date = March 1998 | pmid = 9482740 | pmc = 1170491 | doi = 10.1093/emboj/17.5.1434 }} |
||
*{{cite journal |
* {{cite journal | vauthors = Piper DE, Batchelor AH, Chang CP, Cleary ML, Wolberger C | title = Structure of a HoxB1-Pbx1 heterodimer bound to DNA: role of the hexapeptide and a fourth homeodomain helix in complex formation | journal = Cell | volume = 96 | issue = 4 | pages = 587–597 | date = February 1999 | pmid = 10052460 | doi = 10.1016/S0092-8674(00)80662-5 | s2cid = 16122785 | doi-access = free }} |
||
*{{cite journal |
* {{cite journal | vauthors = Shen WF, Rozenfeld S, Kwong A, Köm ves LG, Lawrence HJ, Largman C | title = HOXA9 forms triple complexes with PBX2 and MEIS1 in myeloid cells | journal = Molecular and Cellular Biology | volume = 19 | issue = 4 | pages = 3051–3061 | date = April 1999 | pmid = 10082572 | pmc = 84099 | doi = 10.1128/MCB.19.4.3051 }} |
||
*{{cite journal |
* {{cite journal | vauthors = Jacobs Y, Schnabel CA, Cleary ML | title = Trimeric association of Hox and TALE homeodomain proteins mediates Hoxb2 hindbrain enhancer activity | journal = Molecular and Cellular Biology | volume = 19 | issue = 7 | pages = 5134–5142 | date = July 1999 | pmid = 10373562 | pmc = 84356 | doi = 10.1128/MCB.19.7.5134 }} |
||
*{{cite journal |
* {{cite journal | vauthors = Knoepfler PS, Bergstrom DA, Uetsuki T, Dac-Korytko I, Sun YH, Wright WE, Tapscott SJ, Kamps MP | display-authors = 6 | title = A conserved motif N-terminal to the DNA-binding domains of myogenic bHLH transcription factors mediates cooperative DNA binding with pbx-Meis1/Prep1 | journal = Nucleic Acids Research | volume = 27 | issue = 18 | pages = 3752–3761 | date = September 1999 | pmid = 10471746 | pmc = 148632 | doi = 10.1093/nar/27.18.3752 }} |
||
*{{cite journal |
* {{cite journal | vauthors = McWhirter JR, Neuteboom ST, Wancewicz EV, Monia BP, Downing JR, Murre C | title = Oncogenic homeodomain transcription factor E2A-Pbx1 activates a novel WNT gene in pre-B acute lymphoblastoid leukemia | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 96 | issue = 20 | pages = 11464–11469 | date = September 1999 | pmid = 10500199 | pmc = 18056 | doi = 10.1073/pnas.96.20.11464 | doi-access = free | bibcode = 1999PNAS...9611464M }} |
||
*{{cite journal |
* {{cite journal | vauthors = Shanmugam K, Green NC, Rambaldi I, Saragovi HU, Featherstone MS | title = PBX and MEIS as non-DNA-binding partners in trimeric complexes with HOX proteins | journal = Molecular and Cellular Biology | volume = 19 | issue = 11 | pages = 7577–7588 | date = November 1999 | pmid = 10523646 | pmc = 84774 | doi = 10.1128/MCB.19.11.7577 }} |
||
*{{cite journal |
* {{cite journal | vauthors = Mikkola I, Bruun JA, Holm T, Johansen T | title = Superactivation of Pax6-mediated transactivation from paired domain-binding sites by dna-independent recruitment of different homeodomain proteins | journal = The Journal of Biological Chemistry | volume = 276 | issue = 6 | pages = 4109–4118 | date = February 2001 | pmid = 11069920 | doi = 10.1074/jbc.M008882200 | doi-access = free }} |
||
*{{cite journal |
* {{cite journal | vauthors = Thameem F, Wolford JK, Bogardus C, Prochazka M | title = Analysis of PBX1 as a candidate gene for type 2 diabetes mellitus in Pima Indians | journal = Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression | volume = 1518 | issue = 1–2 | pages = 215–220 | date = March 2001 | pmid = 11267683 | doi = 10.1016/S0167-4781(01)00189-0 }} |
||
*{{cite journal |
* {{cite journal | vauthors = Liu Y, MacDonald RJ, Swift GH | title = DNA binding and transcriptional activation by a PDX1.PBX1b.MEIS2b trimer and cooperation with a pancreas-specific basic helix-loop-helix complex | journal = The Journal of Biological Chemistry | volume = 276 | issue = 21 | pages = 17985–17993 | date = May 2001 | pmid = 11279116 | doi = 10.1074/jbc.M100678200 | doi-access = free }} |
||
*{{cite journal |
* {{cite journal | vauthors = Mal A, Sturniolo M, Schiltz RL, Ghosh MK, Harter ML | title = A role for histone deacetylase HDAC1 in modulating the transcriptional activity of MyoD: inhibition of the myogenic program | journal = The EMBO Journal | volume = 20 | issue = 7 | pages = 1739–1753 | date = April 2001 | pmid = 11285237 | pmc = 145490 | doi = 10.1093/emboj/20.7.1739 }} |
||
*{{cite journal | author=Liu Y, MacDonald RJ, Swift GH |title=DNA binding and transcriptional activation by a PDX1.PBX1b.MEIS2b trimer and cooperation with a pancreas-specific basic helix-loop-helix complex |journal=J. Biol. Chem. |volume=276 |issue= 21 |pages= 17985–93 |year= 2001 |pmid= 11279116 |doi= 10.1074/jbc.M100678200 }} |
|||
*{{cite journal | author=Mal A, Sturniolo M, Schiltz RL, ''et al.'' |title=A role for histone deacetylase HDAC1 in modulating the transcriptional activity of MyoD: inhibition of the myogenic program |journal=EMBO J. |volume=20 |issue= 7 |pages= 1739–53 |year= 2001 |pmid= 11285237 |doi= 10.1093/emboj/20.7.1739 | pmc=145490 }} |
|||
}} |
|||
{{refend}} |
{{refend}} |
||
{{PDB Gallery|geneid=5087}} |
|||
== External links == |
== External links == |
||
* {{MeshName|PBX1+protein,+human}} |
* {{MeshName|PBX1+protein,+human}} |
||
* {{PDBe-KB2|P40424|Human Pre-B-cell leukemia transcription factor 1}} |
|||
* {{PDBe-KB2|P41778|Mouse Pre-B-cell leukemia transcription factor 1}} |
|||
⚫ | |||
{{Transcription factors|g3}} |
{{Transcription factors|g3}} |
||
<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. --> |
|||
{{PBB_Controls |
|||
| update_page = yes |
|||
| require_manual_inspection = no |
|||
| update_protein_box = yes |
|||
| update_summary = yes |
|||
| update_citations = yes |
|||
}} |
|||
[[Category:Transcription factors]] |
[[Category:Transcription factors]] |
||
{{gene-1-stub}} |
Latest revision as of 08:41, 5 August 2024
Pre-B-cell leukemia transcription factor 1 is a protein that in humans is encoded by the PBX1 gene.[5] The homologous protein in Drosophila is known as extradenticle, and causes changes in embryonic development.
Function
[edit]Mice studies suggest PBX1 is involved in bone generation and skeletal patterning.[6]
Interactions
[edit]PBX1 has been shown to interact with:
Fruit fly homolog
[edit]The Drosophila melangoster gene called extradenticle encodes a homeodomain protein that is 71% similar to the Pbx1 protein, and is considered homologous to PBX1.[14] extradenticle is a homeodomain transcription factor[15] expressed during embryogenesis and is related to morphological changes and development.[14]
Reduced levels of extradenticle cause segmental transformations, without affecting the functionality or location of homeotic genes. Complete removal of extradenticle both maternally and zygotically leads to alterations from failure of non-extradenticle protein expression.[16]
A monoclonal antibody study of the expression of extradenticle protein in embryonic development found that it is uniformly distributed, as well as excluded from cell nuclei, until gastrulation. During the germ band retraction stage of development, extradenticle protein begins to accumulate in the nuclei of cells in a specific pattern. Proximal areas of wing and leg imaginal discs have extradenticle present in the nucleus, while distal areas only have it in the cytoplasm.[17]
References
[edit]- ^ a b c GRCh38: Ensembl release 89: ENSG00000185630 – Ensembl, May 2017
- ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000052534 – Ensembl, May 2017
- ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ "Entrez Gene: PBX1 Pre-B-cell leukemia homeobox 1".
- ^ "PBX1 PBX homeobox 1 [Homo sapiens (human)] - Gene - NCBI". www.ncbi.nlm.nih.gov. Retrieved 2023-06-11.
- ^ Berthelsen J, Zappavigna V, Ferretti E, Mavilio F, Blasi F (March 1998). "The novel homeoprotein Prep1 modulates Pbx-Hox protein cooperativity". The EMBO Journal. 17 (5): 1434–1445. doi:10.1093/emboj/17.5.1434. PMC 1170491. PMID 9482740.
- ^ Piper DE, Batchelor AH, Chang CP, Cleary ML, Wolberger C (February 1999). "Structure of a HoxB1-Pbx1 heterodimer bound to DNA: role of the hexapeptide and a fourth homeodomain helix in complex formation". Cell. 96 (4): 587–597. doi:10.1016/S0092-8674(00)80662-5. PMID 10052460. S2CID 16122785.
- ^ Chang CP, Shen WF, Rozenfeld S, Lawrence HJ, Largman C, Cleary ML (March 1995). "Pbx proteins display hexapeptide-dependent cooperative DNA binding with a subset of Hox proteins". Genes & Development. 9 (6): 663–674. doi:10.1101/gad.9.6.663. PMID 7729685.
- ^ Shen WF, Rozenfeld S, Kwong A, Köm ves LG, Lawrence HJ, Largman C (April 1999). "HOXA9 forms triple complexes with PBX2 and MEIS1 in myeloid cells". Molecular and Cellular Biology. 19 (4): 3051–3061. doi:10.1128/MCB.19.4.3051. PMC 84099. PMID 10082572.
- ^ Shanmugam K, Green NC, Rambaldi I, Saragovi HU, Featherstone MS (November 1999). "PBX and MEIS as non-DNA-binding partners in trimeric complexes with HOX proteins". Molecular and Cellular Biology. 19 (11): 7577–7588. doi:10.1128/MCB.19.11.7577. PMC 84774. PMID 10523646.
- ^ Jacobs Y, Schnabel CA, Cleary ML (July 1999). "Trimeric association of Hox and TALE homeodomain proteins mediates Hoxb2 hindbrain enhancer activity". Molecular and Cellular Biology. 19 (7): 5134–5142. doi:10.1128/MCB.19.7.5134. PMC 84356. PMID 10373562.
- ^ Zubair M, Ishihara S, Oka S, Okumura K, Morohashi K (June 2006). "Two-step regulation of Ad4BP/SF-1 gene transcription during fetal adrenal development: initiation by a Hox-Pbx1-Prep1 complex and maintenance via autoregulation by Ad4BP/SF-1". Molecular and Cellular Biology. 26 (11): 4111–4121. doi:10.1128/MCB.00222-06. PMC 1489093. PMID 16705164.
- ^ a b Rauskolb C, Peifer M, Wieschaus E (September 1993). "extradenticle, a regulator of homeotic gene activity, is a homolog of the homeobox-containing human proto-oncogene pbx1". Cell. 74 (6): 1101–1112. doi:10.1016/0092-8674(93)90731-5. PMID 8104703. S2CID 44721382.
- ^ Aspland SE, White RA (February 1997). "Nucleocytoplasmic localisation of extradenticle protein is spatially regulated throughout development in Drosophila". Development. 124 (3): 741–747. doi:10.1242/dev.124.3.741. PMID 9043089.
- ^ Peifer M, Wieschaus E (July 1990). "Mutations in the Drosophila gene extradenticle affect the way specific homeo domain proteins regulate segmental identity". Genes & Development. 4 (7): 1209–1223. doi:10.1101/gad.4.7.1209. PMID 1976570.
- ^ "Nucleocytoplasmic localisation of extradenticle protein is spatially regulated throughout development in Drosophila". journals.biologists.com. Retrieved 2023-06-06.
Further reading
[edit]- Sanyal M, Tung JW, Karsunky H, Zeng H, Selleri L, Weissman IL, et al. (May 2007). "B-cell development fails in the absence of the Pbx1 proto-oncogene". Blood. 109 (10): 4191–4199. doi:10.1182/blood-2006-10-054213. PMC 1885499. PMID 17244677.
{{cite journal}}
: CS1 maint: overridden setting (link) - Hui H, Perfetti R (February 2002). "Pancreas duodenum homeobox-1 regulates pancreas development during embryogenesis and islet cell function in adulthood". European Journal of Endocrinology. 146 (2): 129–141. doi:10.1530/eje.0.1460129. PMID 11834421.
- Hunger SP, Galili N, Carroll AJ, Crist WM, Link MP, Cleary ML (February 1991). "The t(1;19)(q23;p13) results in consistent fusion of E2A and PBX1 coding sequences in acute lymphoblastic leukemias". Blood. 77 (4): 687–693. doi:10.1182/blood.V77.4.687.687. PMID 1671560.
- Monica K, Galili N, Nourse J, Saltman D, Cleary ML (December 1991). "PBX2 and PBX3, new homeobox genes with extensive homology to the human proto-oncogene PBX1". Molecular and Cellular Biology. 11 (12): 6149–6157. doi:10.1128/mcb.11.12.6149. PMC 361792. PMID 1682799.
- Nourse J, Mellentin JD, Galili N, Wilkinson J, Stanbridge E, Smith SD, et al. (February 1990). "Chromosomal translocation t(1;19) results in synthesis of a homeobox fusion mRNA that codes for a potential chimeric transcription factor". Cell. 60 (4): 535–545. doi:10.1016/0092-8674(90)90657-Z. PMID 1967982. S2CID 7975269.
- Kamps MP, Murre C, Sun XH, Baltimore D (February 1990). "A new homeobox gene contributes the DNA binding domain of the t(1;19) translocation protein in pre-B ALL". Cell. 60 (4): 547–555. doi:10.1016/0092-8674(90)90658-2. PMID 1967983. S2CID 39661371.
- Lu Q, Wright DD, Kamps MP (June 1994). "Fusion with E2A converts the Pbx1 homeodomain protein into a constitutive transcriptional activator in human leukemias carrying the t(1;19) translocation". Molecular and Cellular Biology. 14 (6): 3938–3948. doi:10.1128/mcb.14.6.3938. PMC 358760. PMID 7910944.
- Van Dijk MA, Voorhoeve PM, Murre C (July 1993). "Pbx1 is converted into a transcriptional activator upon acquiring the N-terminal region of E2A in pre-B-cell acute lymphoblastoid leukemia". Proceedings of the National Academy of Sciences of the United States of America. 90 (13): 6061–6065. Bibcode:1993PNAS...90.6061D. doi:10.1073/pnas.90.13.6061. PMC 46867. PMID 8327485.
- Lu Q, Kamps MP (April 1996). "Structural determinants within Pbx1 that mediate cooperative DNA binding with pentapeptide-containing Hox proteins: proposal for a model of a Pbx1-Hox-DNA complex". Molecular and Cellular Biology. 16 (4): 1632–1640. doi:10.1128/mcb.16.4.1632. PMC 231149. PMID 8657138.
- Berthelsen J, Zappavigna V, Mavilio F, Blasi F (March 1998). "Prep1, a novel functional partner of Pbx proteins". The EMBO Journal. 17 (5): 1423–1433. doi:10.1093/emboj/17.5.1423. PMC 1170490. PMID 9482739.
- Berthelsen J, Zappavigna V, Ferretti E, Mavilio F, Blasi F (March 1998). "The novel homeoprotein Prep1 modulates Pbx-Hox protein cooperativity". The EMBO Journal. 17 (5): 1434–1445. doi:10.1093/emboj/17.5.1434. PMC 1170491. PMID 9482740.
- Piper DE, Batchelor AH, Chang CP, Cleary ML, Wolberger C (February 1999). "Structure of a HoxB1-Pbx1 heterodimer bound to DNA: role of the hexapeptide and a fourth homeodomain helix in complex formation". Cell. 96 (4): 587–597. doi:10.1016/S0092-8674(00)80662-5. PMID 10052460. S2CID 16122785.
- Shen WF, Rozenfeld S, Kwong A, Köm ves LG, Lawrence HJ, Largman C (April 1999). "HOXA9 forms triple complexes with PBX2 and MEIS1 in myeloid cells". Molecular and Cellular Biology. 19 (4): 3051–3061. doi:10.1128/MCB.19.4.3051. PMC 84099. PMID 10082572.
- Jacobs Y, Schnabel CA, Cleary ML (July 1999). "Trimeric association of Hox and TALE homeodomain proteins mediates Hoxb2 hindbrain enhancer activity". Molecular and Cellular Biology. 19 (7): 5134–5142. doi:10.1128/MCB.19.7.5134. PMC 84356. PMID 10373562.
- Knoepfler PS, Bergstrom DA, Uetsuki T, Dac-Korytko I, Sun YH, Wright WE, et al. (September 1999). "A conserved motif N-terminal to the DNA-binding domains of myogenic bHLH transcription factors mediates cooperative DNA binding with pbx-Meis1/Prep1". Nucleic Acids Research. 27 (18): 3752–3761. doi:10.1093/nar/27.18.3752. PMC 148632. PMID 10471746.
{{cite journal}}
: CS1 maint: overridden setting (link) - McWhirter JR, Neuteboom ST, Wancewicz EV, Monia BP, Downing JR, Murre C (September 1999). "Oncogenic homeodomain transcription factor E2A-Pbx1 activates a novel WNT gene in pre-B acute lymphoblastoid leukemia". Proceedings of the National Academy of Sciences of the United States of America. 96 (20): 11464–11469. Bibcode:1999PNAS...9611464M. doi:10.1073/pnas.96.20.11464. PMC 18056. PMID 10500199.
- Shanmugam K, Green NC, Rambaldi I, Saragovi HU, Featherstone MS (November 1999). "PBX and MEIS as non-DNA-binding partners in trimeric complexes with HOX proteins". Molecular and Cellular Biology. 19 (11): 7577–7588. doi:10.1128/MCB.19.11.7577. PMC 84774. PMID 10523646.
- Mikkola I, Bruun JA, Holm T, Johansen T (February 2001). "Superactivation of Pax6-mediated transactivation from paired domain-binding sites by dna-independent recruitment of different homeodomain proteins". The Journal of Biological Chemistry. 276 (6): 4109–4118. doi:10.1074/jbc.M008882200. PMID 11069920.
- Thameem F, Wolford JK, Bogardus C, Prochazka M (March 2001). "Analysis of PBX1 as a candidate gene for type 2 diabetes mellitus in Pima Indians". Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression. 1518 (1–2): 215–220. doi:10.1016/S0167-4781(01)00189-0. PMID 11267683.
- Liu Y, MacDonald RJ, Swift GH (May 2001). "DNA binding and transcriptional activation by a PDX1.PBX1b.MEIS2b trimer and cooperation with a pancreas-specific basic helix-loop-helix complex". The Journal of Biological Chemistry. 276 (21): 17985–17993. doi:10.1074/jbc.M100678200. PMID 11279116.
- Mal A, Sturniolo M, Schiltz RL, Ghosh MK, Harter ML (April 2001). "A role for histone deacetylase HDAC1 in modulating the transcriptional activity of MyoD: inhibition of the myogenic program". The EMBO Journal. 20 (7): 1739–1753. doi:10.1093/emboj/20.7.1739. PMC 145490. PMID 11285237.
External links
[edit]- PBX1+protein,+human at the U.S. National Library of Medicine Medical Subject Headings (MeSH)
- Overview of all the structural information available in the PDB for UniProt: P40424 (Human Pre-B-cell leukemia transcription factor 1) at the PDBe-KB.
- Overview of all the structural information available in the PDB for UniProt: P41778 (Mouse Pre-B-cell leukemia transcription factor 1) at the PDBe-KB.