Conosa: Difference between revisions
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{{Short description|Phylum of protozoans}} |
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{{Taxobox |
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{{Automatic taxobox |
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| image = Dictyostelium discoideum 02.jpg |
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| image_caption = ''[[ |
| image_caption = ''[[Dictyostelium discoideum]]'' |
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| domain = [[eukaryote|Eukaryota]] |
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| phylum = [[Amoebozoa]] |
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*[[Mycetozoa]] |
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*[[Archamoebae]] |
*[[Archamoebae]] |
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*[[Variosea]] |
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*[[Eumycetozoa]] |
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}} |
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| ⚫ | '''Conosa''' is a grouping of [[Amoebozoa]]. It is subdivided into |
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*[[Mycetozoa]] a grouping of [[slime molds]], |
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*[[Archamoebae]] distinguished by the absence of [[mitochondria]]. |
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| ⚫ | '''Conosa''' is a grouping of [[Amoebozoa]]. It is subdivided into three groups: [[Archamoebae|Archamoeba]], [[Variosea]] and [[Mycetozoa]].<ref name="pmid9809012">{{cite journal |author=Cavalier-Smith T |title=A revised six-kingdom system of life |journal=Biol Rev Camb Philos Soc |volume=73 |issue=3 |pages=203–66 |date=August 1998 |pmid=9809012 |doi= 10.1111/j.1469-185X.1998.tb00030.x|s2cid=6557779 |url=http://www3.interscience.wiley.com/resolve/openurl?genre=article&sid=nlm:pubmed&issn=1464-7931&date=1998&volume=73&issue=3&spage=203|archive-url=https://archive.today/20121205040851/http://www3.interscience.wiley.com/resolve/openurl?genre=article&sid=nlm:pubmed&issn=1464-7931&date=1998&volume=73&issue=3&spage=203|url-status=dead|archive-date=2012-12-05}}</ref><ref name="pmid11830664">{{cite journal |vauthors=Bapteste E, Brinkmann H, Lee JA |title=The analysis of 100 genes supports the grouping of three highly divergent amoebae: Dictyostelium, Entamoeba, and Mastigamoeba |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue=3 |pages=1414–9 |date=February 2002 |pmid=11830664 |pmc=122205 |doi=10.1073/pnas.032662799 |bibcode=2002PNAS...99.1414B |display-authors=etal|doi-access=free }}</ref> |
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| ⚫ | Conosa includes the species ''[[Dictyostelium discoideum]]'' and ''[[Entamoeba histolytica]]'', among others.<ref name="pmid16362072">{{cite journal |vauthors=Song J, Xu Q, Olsen R |title=Comparing the Dictyostelium and Entamoeba genomes reveals an ancient split in the Conosa lineage |journal= |
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In some classifications, the mycetozoan [[Myxogastria]] and [[Dictyostelia]] are united in [[Macromycetozoa]] (= Eumycetozoa).<ref name="Adl 2019">{{cite journal|vauthors=Adl SM, Bass D, Lane CE, Lukeš J, Schoch CL, Smirnov A, Agatha S, Berney C, Brown MW, Burki F, Cárdenas P, Čepička I, Chistyakova L, del Campo J, Dunthorn M, Edvardsen B, Eglit Y, Guillou L, Hampl V, Heiss AA, Hoppenrath M, James TY, Karnkowska A, Karpov S, Kim E, Kolisko M, Kudryavtsev A, ((Lahr DJG)), Lara E, Le Gall L, Lynn DH, Mann DG, Massana R, ((Mitchell EAD)), Morrow C, Park JS, Pawlowski JW, Powell MJ, Richter DJ, Rueckert S, Shadwick L, Shimano S, Spiegel FW, Torruella G, Youssef N, Zlatogursky V, Zhang Q|year=2019|title=Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes|journal=Journal of Eukaryotic Microbiology|volume=66|issue=1 |pages=4–119|doi=10.1111/jeu.12691|pmid=30257078 |pmc=6492006 }}</ref> |
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| ⚫ | Conosa includes the species ''[[Dictyostelium discoideum]],'' a social amoeba, and ''[[Entamoeba histolytica]]'', a human [[pathogen]], among others.<ref name="pmid16362072">{{cite journal |vauthors=Song J, Xu Q, Olsen R |title=Comparing the Dictyostelium and Entamoeba genomes reveals an ancient split in the Conosa lineage |journal=PLOS Comput. Biol. |volume=1 |issue=7 |pages=e71 |date=December 2005 |pmid=16362072 |pmc=1314882 |doi=10.1371/journal.pcbi.0010071 |bibcode=2005PLSCB...1...71S |display-authors=etal |doi-access=free }}</ref> |
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Conosa are [[Morphology (biology)|morphologically]] defined by a conical microtubular structure,<ref name="pmid9809012" /><ref name=":1">{{Cite journal |last1=Cavalier-Smith |first1=Thomas |last2=Fiore-Donno |first2=Anna Maria |last3=Chao |first3=Ema |last4=Kudryavtsev |first4=Alexander |last5=Berney |first5=Cédric |last6=Snell |first6=Elizabeth A. |last7=Lewis |first7=Rhodri |date=February 2015 |title=Multigene phylogeny resolves deep branching of Amoebozoa |journal=Molecular Phylogenetics and Evolution |language=en |volume=83 |pages=293–304 |doi=10.1016/j.ympev.2014.08.011|doi-access=free }}</ref><ref name=":0">{{Cite journal |last1=Pánek |first1=Tomáš |last2=Zadrobílková |first2=Eliška |last3=Walker |first3=Giselle |last4=Brown |first4=Matthew W. |last5=Gentekaki |first5=Eleni |last6=Hroudová |first6=Miluše |last7=Kang |first7=Seungho |last8=Roger |first8=Andrew J. |last9=Tice |first9=Alexander K. |last10=Vlček |first10=Čestmír |last11=Čepička |first11=Ivan |date=2016-05-01 |title=First multigene analysis of Archamoebae (Amoebozoa: Conosa) robustly reveals its phylogeny and shows that Entamoebidae represents a deep lineage of the group |url=https://www.sciencedirect.com/science/article/pii/S1055790316000270 |journal=Molecular Phylogenetics and Evolution |language=en |volume=98 |pages=41–51 |doi=10.1016/j.ympev.2016.01.011 |issn=1055-7903|doi-access=free }}</ref> and have been found to be monophyletic.<ref name="pmid11830664" /><ref name=":1" /> |
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== Characteristics == |
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The Conosa group was first proposed by Thomas Cavalier-Smith in 1998 as a subphylum of [[Amoebozoa]].<ref name="pmid9809012" /> Cavalier-Smith originally separated this group into 2 infraphyla: [[Archamoebae]] and [[Mycetozoa]].<ref name="pmid9809012" /> Notable characteristics of these two groups are that Mycetozoa are free living, while Archamoebae are amitochondrial.<ref name="pmid16362072" /> This clade is morphologically defined by their complex [[Microtubule|microtubular]] skeleton that forms a partial or complete cone.<ref name=":1" /><ref name=":0" /> They have a monolayer of microtubules that surround at least some of the anterior end of the cell and diverge into a cone shape towards the nucleus at the posterior end.<ref name="pmid9809012" /><ref name=":0" /> This cone of microtubules usually starts at a single [[centriole]] and extends towards the nucleus.<ref name="pmid9809012" /> They also have a lateral microtubular ribbon towards the cell surface.<ref name="pmid9809012" /> Conosa can exist as aggregate [[Aerobic organism|aerobes]] with [[Mitochondrion|mitochondria]] and also as solitary [[Anaerobic organism|anaerobes]] with no mitochondria or [[peroxisome]]s.<ref name="pmid9809012" /> There are mitochondriate and amitochondriate members, as well as free living and parasitic representatives.<ref name="pmid11830664" /> Mitochondria reduction could be a result of transitions to a parasitic lifestyle,<ref name="pmid11830664" /> as is seen in the amitochondral human parasite ''Entamoeba histolytica.''<ref name="pmid16362072" /> |
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== Phylogeny == |
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Conosa are separated from [[Lobosa]], the other Amoebozoa subphylum, by morphological characteristics and genomic differences. Conosa have both amoeboid and [[Flagellum|flagellate]] forms or stages and more pointed [[pseudopodia]] with branches. In contrast, Lobosa are entirely amoeboid with broad pseudopodia.<ref name=":1" /> Conosa's flagella are artifacts of their ancestral conditions and are seen in trophic and swarm cell phases.<ref name=":1" /> Flagellate Conosa have a cone-shaped microtubular skeleton, and non-ciliate forms contain extensive microtubes in the [[cytoplasm]], both of which are not seen in Lobosa.<ref name=":1" /> |
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While morphological characteristics like pseudopodia and body shape, flagella, and cytoplasm properties have not been regarded as convincing taxonomic suggestions,<ref name="pmid11830664" /> emerging sequencing data is being used to support Conosa’s monophyly. A study using several hundred phylogenetic markers of 30 species found Conosa to be monophyletic as representatives of Mycetozoa, Entamoebidae, and Pelobionta grouped together using several amino acid sequencing analysis methods.<ref name="pmid11830664" /> The monophyly of Conosa and the Archamoebea infraphyla was also supported by cDNA sequencing of 17 Amoebozoans.<ref name=":1" /> However, the monophyly of Conosa is not entirely supported. For example, another study using 7 protein coding genes did not find Conosa to be monophyletic due to members of Lobosa sharing a phylogenetic branch with the Conosan lineage Variosea.<ref name=":0" /> This same study did find all three Conosan lineages to be monophyletic.<ref name=":0" /> |
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{{clade|{{clade|label1=[[Discosea]]|1={{clade|1=[[Flabellinia]]|2=[[Centramoebia]]}}|barbegin1=grey|label2=[[Tevosa]]|2={{clade|label1=[[Tubulinea]]|bar1=grey|1={{clade|1=[[Corycidia]]|2={{clade|1=[[Echinamoebia]]|2=[[Elardia]]}}}}|label2=[[Evosea]]|2={{clade|1=[[Cutosea]]|barend1=grey|label2=Conosa|2={{clade|1=[[Archamoebea]]|label2=[[Semiconosia]]|2={{clade|1=[[Variosea]]|label2=[[Eumycetozoa]]|2={{clade|1=[[Dictyostelea]]|2={{clade|1=[[Ceratiomyxea]]|2=[[Myxogastrea]]}}}}}}}}}} |
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}} |
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}}|[[Opisthokonta]]|style=font-size:90%;|label1=[[Amoebozoa]]}} |
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== Evolution == |
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The [[Most recent common ancestor|last common ancestor]] of Conosa was likely an aerobic [[protist]] with anterior and recurrent flagellum.<ref name=":0" /> It likely had mitochondria, while mitochondrial reduction has resulted in both mitochondriate and amitochondriate members today.<ref name="pmid11830664" /> The ancestral biflagellate condition is seen in some extant Conosa forms.<ref name=":1" /> In some Archamoebae, the posterior flagella and its related cytoskeleton has been lost, and others have lost the entire flagellar system.<ref name=":0" /> The conical microtubular skeleton [[Convergent evolution|convergently evolved]] in Archamoebae and Variosea, but not in Mycetozoa.<ref name=":1" /> A study of the complete proteomic content of 23 eukaryotic genomes found that representative members of Mycetozoa and Archamoebae do share a common ancestor, and their divergence occurred almost as long ago as the split of [[Fungus|fungi]] and [[animal]]s.<ref name="pmid16362072" /> |
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== Gallery == |
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<gallery> |
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File:Entamoeba histolytica.jpg|''[[Entamoeba histolytica]]'' [[trophozoite]] |
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Pelomyxa palustris.jpg|''[[Pelomyxa palustris]]'' |
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File:Badhamia_utricularis_mature.jpg|''[[Badhamia]] utricularis'' ([[Myxogastria]]: [[Physarales]]) |
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</gallery> |
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==References== |
==References== |
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{{ |
{{Reflist}} |
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{{Eukaryota classification}} |
{{Eukaryota classification}} |
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{{Amoebozoa}} |
{{Amoebozoa}} |
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{{Taxonbar|from=Q1130241}} |
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[[Category:Conosa| ]] |
[[Category:Conosa| ]] |
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[[Category:Taxa named by Thomas Cavalier-Smith]] |
[[Category:Taxa named by Thomas Cavalier-Smith]] |
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[[Category: |
[[Category:Amorphea subphyla]] |
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{{Amoebozoa-stub}} |
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Latest revision as of 15:59, 4 October 2024
| Conosa | |
|---|---|
| |
| Dictyostelium discoideum | |
Scientific classification 
| |
| Domain: | Eukaryota |
| Phylum: | Amoebozoa |
| Clade: | Evosea |
| Subphylum: | Conosa Cavalier-Smith, 1998 |
| Infraphyla | |
Conosa is a grouping of Amoebozoa. It is subdivided into three groups: Archamoeba, Variosea and Mycetozoa.[1][2]
In some classifications, the mycetozoan Myxogastria and Dictyostelia are united in Macromycetozoa (= Eumycetozoa).[3]
Conosa includes the species Dictyostelium discoideum, a social amoeba, and Entamoeba histolytica, a human pathogen, among others.[4]
Conosa are morphologically defined by a conical microtubular structure,[1][5][6] and have been found to be monophyletic.[2][5]
Characteristics
[edit]The Conosa group was first proposed by Thomas Cavalier-Smith in 1998 as a subphylum of Amoebozoa.[1] Cavalier-Smith originally separated this group into 2 infraphyla: Archamoebae and Mycetozoa.[1] Notable characteristics of these two groups are that Mycetozoa are free living, while Archamoebae are amitochondrial.[4] This clade is morphologically defined by their complex microtubular skeleton that forms a partial or complete cone.[5][6] They have a monolayer of microtubules that surround at least some of the anterior end of the cell and diverge into a cone shape towards the nucleus at the posterior end.[1][6] This cone of microtubules usually starts at a single centriole and extends towards the nucleus.[1] They also have a lateral microtubular ribbon towards the cell surface.[1] Conosa can exist as aggregate aerobes with mitochondria and also as solitary anaerobes with no mitochondria or peroxisomes.[1] There are mitochondriate and amitochondriate members, as well as free living and parasitic representatives.[2] Mitochondria reduction could be a result of transitions to a parasitic lifestyle,[2] as is seen in the amitochondral human parasite Entamoeba histolytica.[4]
Phylogeny
[edit]Conosa are separated from Lobosa, the other Amoebozoa subphylum, by morphological characteristics and genomic differences. Conosa have both amoeboid and flagellate forms or stages and more pointed pseudopodia with branches. In contrast, Lobosa are entirely amoeboid with broad pseudopodia.[5] Conosa's flagella are artifacts of their ancestral conditions and are seen in trophic and swarm cell phases.[5] Flagellate Conosa have a cone-shaped microtubular skeleton, and non-ciliate forms contain extensive microtubes in the cytoplasm, both of which are not seen in Lobosa.[5]
While morphological characteristics like pseudopodia and body shape, flagella, and cytoplasm properties have not been regarded as convincing taxonomic suggestions,[2] emerging sequencing data is being used to support Conosa’s monophyly. A study using several hundred phylogenetic markers of 30 species found Conosa to be monophyletic as representatives of Mycetozoa, Entamoebidae, and Pelobionta grouped together using several amino acid sequencing analysis methods.[2] The monophyly of Conosa and the Archamoebea infraphyla was also supported by cDNA sequencing of 17 Amoebozoans.[5] However, the monophyly of Conosa is not entirely supported. For example, another study using 7 protein coding genes did not find Conosa to be monophyletic due to members of Lobosa sharing a phylogenetic branch with the Conosan lineage Variosea.[6] This same study did find all three Conosan lineages to be monophyletic.[6]
Evolution
[edit]The last common ancestor of Conosa was likely an aerobic protist with anterior and recurrent flagellum.[6] It likely had mitochondria, while mitochondrial reduction has resulted in both mitochondriate and amitochondriate members today.[2] The ancestral biflagellate condition is seen in some extant Conosa forms.[5] In some Archamoebae, the posterior flagella and its related cytoskeleton has been lost, and others have lost the entire flagellar system.[6] The conical microtubular skeleton convergently evolved in Archamoebae and Variosea, but not in Mycetozoa.[5] A study of the complete proteomic content of 23 eukaryotic genomes found that representative members of Mycetozoa and Archamoebae do share a common ancestor, and their divergence occurred almost as long ago as the split of fungi and animals.[4]
Gallery
[edit]
References
[edit]- ^ a b c d e f g h Cavalier-Smith T (August 1998). "A revised six-kingdom system of life". Biol Rev Camb Philos Soc. 73 (3): 203–66. doi:10.1111/j.1469-185X.1998.tb00030.x. PMID 9809012. S2CID 6557779. Archived from the original on 2012-12-05.
- ^ a b c d e f g Bapteste E, Brinkmann H, Lee JA, et al. (February 2002). "The analysis of 100 genes supports the grouping of three highly divergent amoebae: Dictyostelium, Entamoeba, and Mastigamoeba". Proc. Natl. Acad. Sci. U.S.A. 99 (3): 1414–9. Bibcode:2002PNAS...99.1414B. doi:10.1073/pnas.032662799. PMC 122205. PMID 11830664.
- ^ Adl SM, Bass D, Lane CE, Lukeš J, Schoch CL, Smirnov A, Agatha S, Berney C, Brown MW, Burki F, Cárdenas P, Čepička I, Chistyakova L, del Campo J, Dunthorn M, Edvardsen B, Eglit Y, Guillou L, Hampl V, Heiss AA, Hoppenrath M, James TY, Karnkowska A, Karpov S, Kim E, Kolisko M, Kudryavtsev A, Lahr DJG, Lara E, Le Gall L, Lynn DH, Mann DG, Massana R, Mitchell EAD, Morrow C, Park JS, Pawlowski JW, Powell MJ, Richter DJ, Rueckert S, Shadwick L, Shimano S, Spiegel FW, Torruella G, Youssef N, Zlatogursky V, Zhang Q (2019). "Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes". Journal of Eukaryotic Microbiology. 66 (1): 4–119. doi:10.1111/jeu.12691. PMC 6492006. PMID 30257078.
- ^ a b c d Song J, Xu Q, Olsen R, et al. (December 2005). "Comparing the Dictyostelium and Entamoeba genomes reveals an ancient split in the Conosa lineage". PLOS Comput. Biol. 1 (7): e71. Bibcode:2005PLSCB...1...71S. doi:10.1371/journal.pcbi.0010071. PMC 1314882. PMID 16362072.
- ^ a b c d e f g h i Cavalier-Smith, Thomas; Fiore-Donno, Anna Maria; Chao, Ema; Kudryavtsev, Alexander; Berney, Cédric; Snell, Elizabeth A.; Lewis, Rhodri (February 2015). "Multigene phylogeny resolves deep branching of Amoebozoa". Molecular Phylogenetics and Evolution. 83: 293–304. doi:10.1016/j.ympev.2014.08.011.
- ^ a b c d e f g Pánek, Tomáš; Zadrobílková, Eliška; Walker, Giselle; Brown, Matthew W.; Gentekaki, Eleni; Hroudová, Miluše; Kang, Seungho; Roger, Andrew J.; Tice, Alexander K.; Vlček, Čestmír; Čepička, Ivan (2016-05-01). "First multigene analysis of Archamoebae (Amoebozoa: Conosa) robustly reveals its phylogeny and shows that Entamoebidae represents a deep lineage of the group". Molecular Phylogenetics and Evolution. 98: 41–51. doi:10.1016/j.ympev.2016.01.011. ISSN 1055-7903.
