CD79B: Difference between revisions

CD79B
Available structures
PDB	Ortholog search: PDBe RCSB
List of PDB id codes
	3KG5
Identifiers
Aliases	CD79B, AGM6, B29, IGB, CD79b molecule, Igbeta
External IDs	OMIM: 147245; MGI: 96431; HomoloGene: 521; GeneCards: CD79B; OMA:CD79B - orthologs
Gene location (Human)
Chr.	Chromosome 17 (human)
End	63,932,336 bp
Gene location (Mouse)
Chr.	Chromosome 11 (mouse)
End	106,205,588 bp
RNA expression pattern
	Top expressed in
	granulocyte; ; spleen; ; lymph node; ; appendix; ; apex of heart; ; blood; ; monocyte; ; gonad; ; bone marrow; ; anterior pituitary;
	Top expressed in
	mesenteric lymph nodes; ; spleen; ; tibiofemoral joint; ; blood; ; bone marrow; ; granulocyte; ; submandibular gland; ; thymus; ; subcutaneous adipose tissue; ; tunica adventitia of aorta;
	More reference expression data
	More reference expression data
Gene ontology
Molecular function	protein binding; transmembrane signaling receptor activity; protein homodimerization activity; identical protein binding;
Cellular component	integral component of membrane; plasma membrane; Golgi apparatus; integral component of plasma membrane; extracellular exosome; membrane; nucleoplasm; external side of plasma membrane; B cell receptor complex; cytoplasm; cytosol;
Biological process	cell surface receptor signaling pathway; adaptive immune response; immune response; signal transduction; immune system process; B cell differentiation; B cell receptor signaling pathway; protein homooligomerization; response to bacterium;
	Sources:Amigo / QuickGO
Orthologs
	974
	15985
	ENSG00000007312
	ENSMUSG00000040592
	P40259
	P15530
	NM_000626; NM_001039933; NM_021602; NM_001329050
	NM_008339; NM_001313939
	NP_000617; NP_001035022; NP_001315979; NP_067613
	NP_001300868; NP_032365
	Wikidata
View/Edit Human	View/Edit Mouse

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Latest revision as of 07:19, 15 October 2024

CD79b molecule, immunoglobulin-associated beta, also known as CD79B (Cluster of Differentiation 79B), is a human gene.^[5]

It is associated with agammaglobulinemia-6.

The B lymphocyte antigen receptor is a multimeric complex that includes the antigen-specific component, surface immunoglobulin (Ig). Surface Ig non-covalently associates with two other proteins, Ig-alpha and Ig-beta, which are necessary for expression and function of the B-cell antigen receptor. This gene encodes the Ig-beta protein of the B-cell antigen component. Alternatively spliced transcript variants encoding different isoforms have been described.^[5]

References

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000007312 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000040592 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ ^a ^b "Entrez Gene: CD79B CD79b molecule, immunoglobulin-associated beta".

Reth M (1992). "Antigen receptors on B lymphocytes". Annu. Rev. Immunol. 10: 97–121. doi:10.1146/annurev.iy.10.040192.000525. PMID 1591006.
Müller B, Cooper L, Terhorst C (1992). "Cloning and sequencing of the cDNA encoding the human homologue of the murine immunoglobulin-associated protein B29". Eur. J. Immunol. 22 (6): 1621–5. doi:10.1002/eji.1830220641. PMID 1534761. S2CID 23910309.
Lankester AC, van Schijndel GM, Cordell JL, et al. (1994). "CD5 is associated with the human B cell antigen receptor complex". Eur. J. Immunol. 24 (4): 812–6. doi:10.1002/eji.1830240406. PMID 7512031. S2CID 25093082.
Vasile S, Coligan JE, Yoshida M, Seon BK (1994). "Isolation and chemical characterization of the human B29 and mb-1 proteins of the B cell antigen receptor complex". Mol. Immunol. 31 (6): 419–27. doi:10.1016/0161-5890(94)90061-2. PMID 7514267.
Brown VK, Ogle EW, Burkhardt AL, et al. (1994). "Multiple components of the B cell antigen receptor complex associate with the protein tyrosine phosphatase, CD45". J. Biol. Chem. 269 (25): 17238–44. doi:10.1016/S0021-9258(17)32545-0. PMID 7516335.
Rowley RB, Burkhardt AL, Chao HG, et al. (1995). "Syk protein-tyrosine kinase is regulated by tyrosine-phosphorylated Ig alpha/Ig beta immunoreceptor tyrosine activation motif binding and autophosphorylation". J. Biol. Chem. 270 (19): 11590–4. doi:10.1074/jbc.270.19.11590. PMID 7538118.
Pani G, Kozlowski M, Cambier JC, et al. (1995). "Identification of the tyrosine phosphatase PTP1C as a B cell antigen receptor-associated protein involved in the regulation of B cell signaling". J. Exp. Med. 181 (6): 2077–84. doi:10.1084/jem.181.6.2077. PMC 2192043. PMID 7539038.
Müller B, Cooper L, Terhorst C (1995). "Interplay between the human TCR/CD3 epsilon and the B-cell antigen receptor associated Ig-beta (B29)". Immunol. Lett. 44 (2–3): 97–103. doi:10.1016/0165-2478(94)00199-2. PMID 7541024.
Saouaf SJ, Kut SA, Fargnoli J, et al. (1995). "Reconstitution of the B cell antigen receptor signaling components in COS cells". J. Biol. Chem. 270 (45): 27072–8. doi:10.1074/jbc.270.45.27072. PMID 7592958.
Hashimoto S, Chiorazzi N, Gregersen PK (1995). "Alternative splicing of CD79a (Ig-alpha/mb-1) and CD79b (Ig-beta/B29) RNA transcripts in human B cells". Mol. Immunol. 32 (9): 651–9. doi:10.1016/0161-5890(95)00023-8. PMID 7643857.
Hashimoto S, Chiorazzi N, Gregersen PK (1994). "The complete sequence of the human CD79b (Ig beta/B29) gene: identification of a conserved exon/intron organization, immunoglobulin-like regulatory regions, and allelic polymorphism". Immunogenetics. 40 (2): 145–9. doi:10.1007/BF00188178. PMID 7913081. S2CID 6966566.
Gold MR, Chiu R, Ingham RJ, et al. (1994). "Activation and serine phosphorylation of the p56lck protein tyrosine kinase in response to antigen receptor cross-linking in B lymphocytes". J. Immunol. 153 (6): 2369–80. doi:10.4049/jimmunol.153.6.2369. PMID 8077654. S2CID 22158525.
Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
Hashimoto S, Gregersen PK, Chiorazzi N (1993). "The human Ig-beta cDNA sequence, a homologue of murine B29, is identical in B cell and plasma cell lines producing all the human Ig isotypes". J. Immunol. 150 (2): 491–8. doi:10.4049/jimmunol.150.2.491. PMID 8419481. S2CID 36149482.
Wood WJ, Thompson AA, Korenberg J, et al. (1993). "Isolation and chromosomal mapping of the human immunoglobulin-associated B29 gene (IGB)". Genomics. 16 (1): 187–92. doi:10.1006/geno.1993.1157. PMID 8486355.
Thompson AA, Wood WJ, Gilly MJ, et al. (1996). "The promoter and 5' flanking sequences controlling human B29 gene expression". Blood. 87 (2): 666–73. doi:10.1182/blood.V87.2.666.bloodjournal872666. PMID 8555489.
Astsaturov IA, Matutes E, Morilla R, et al. (1996). "Differential expression of B29 (CD79b) and mb-1 (CD79a) proteins in acute lymphoblastic leukaemia". Leukemia. 10 (5): 769–73. PMID 8656670.
Koyama M, Nakamura T, Higashihara M, et al. (1996). "The novel variants of mb-1 and B29 transcripts generated by alternative mRNA splicing". Immunol. Lett. 47 (3): 151–6. doi:10.1016/0165-2478(95)00071-X. PMID 8747711.
Carter RH, Doody GM, Bolen JB, Fearon DT (1997). "Membrane IgM-induced tyrosine phosphorylation of CD19 requires a CD19 domain that mediates association with components of the B cell antigen receptor complex". J. Immunol. 158 (7): 3062–9. doi:10.4049/jimmunol.158.7.3062. PMID 9120258. S2CID 20717278.

External links

CD79B+protein,+human at the U.S. National Library of Medicine Medical Subject Headings (MeSH)
Human CD79B genome location and CD79B gene details page in the UCSC Genome Browser.
PDBe-KB provides an overview of all the structure information available in the PDB for Human B-cell antigen receptor complex-associated protein beta chain (CD79B)

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

This membrane protein–related article is a stub. You can help Wikipedia by expanding it.

[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000007312 – Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000040592 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[entrez-5] "Entrez Gene: CD79B CD79b molecule, immunoglobulin-associated beta".

[1]

[2]

[3]

[4]

[5]

@@ Line 1: / Line 1: @@
-{{Short description|Mammalian protein found in Homo sapiens}}
+{{Short description|Protein-coding gene in humans}}
 {{Infobox_gene}}
 '''CD79b molecule, immunoglobulin-associated beta''', also known as '''CD79B''' ('''C'''luster of '''D'''ifferentiation 79B), is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: CD79B CD79b molecule, immunoglobulin-associated beta| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=974}}</ref>
@@ Line 26: / Line 26: @@
 *{{cite journal  | vauthors=Hashimoto S, Chiorazzi N, Gregersen PK |title=Alternative splicing of CD79a (Ig-alpha/mb-1) and CD79b (Ig-beta/B29) RNA transcripts in human B cells |journal=Mol. Immunol. |volume=32 |issue= 9 |pages= 651–9 |year= 1995 |pmid= 7643857 |doi=10.1016/0161-5890(95)00023-8  |doi-access=free }}
 *{{cite journal  | vauthors=Hashimoto S, Chiorazzi N, Gregersen PK |title=The complete sequence of the human CD79b (Ig beta/B29) gene: identification of a conserved exon/intron organization, immunoglobulin-like regulatory regions, and allelic polymorphism |journal=Immunogenetics |volume=40 |issue= 2 |pages= 145–9 |year= 1994 |pmid= 7913081 |doi=10.1007/BF00188178  |s2cid=6966566 }}
-*{{cite journal  | vauthors=Gold MR, Chiu R, Ingham RJ |title=Activation and serine phosphorylation of the p56lck protein tyrosine kinase in response to antigen receptor cross-linking in B lymphocytes |journal=J. Immunol. |volume=153 |issue= 6 |pages= 2369–80 |year= 1994 |pmid= 8077654 |display-authors=etal}}
+*{{cite journal  | vauthors=Gold MR, Chiu R, Ingham RJ |title=Activation and serine phosphorylation of the p56lck protein tyrosine kinase in response to antigen receptor cross-linking in B lymphocytes |journal=J. Immunol. |volume=153 |issue= 6 |pages= 2369–80 |year= 1994 |doi=10.4049/jimmunol.153.6.2369 |pmid= 8077654 |s2cid=22158525 |display-authors=etal}}
 *{{cite journal  | vauthors=Maruyama K, Sugano S |title=Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides |journal=Gene |volume=138 |issue= 1–2 |pages= 171–4 |year= 1994 |pmid= 8125298 |doi=10.1016/0378-1119(94)90802-8  }}
-*{{cite journal  | vauthors=Hashimoto S, Gregersen PK, Chiorazzi N |title=The human Ig-beta cDNA sequence, a homologue of murine B29, is identical in B cell and plasma cell lines producing all the human Ig isotypes |journal=J. Immunol. |volume=150 |issue= 2 |pages= 491–8 |year= 1993 |pmid= 8419481 }}
+*{{cite journal  | vauthors=Hashimoto S, Gregersen PK, Chiorazzi N |title=The human Ig-beta cDNA sequence, a homologue of murine B29, is identical in B cell and plasma cell lines producing all the human Ig isotypes |journal=J. Immunol. |volume=150 |issue= 2 |pages= 491–8 |year= 1993 |doi=10.4049/jimmunol.150.2.491 |pmid= 8419481 |s2cid=36149482 |doi-access=free }}
 *{{cite journal  | vauthors=Wood WJ, Thompson AA, Korenberg J |title=Isolation and chromosomal mapping of the human immunoglobulin-associated B29 gene (IGB) |journal=Genomics |volume=16 |issue= 1 |pages= 187–92 |year= 1993 |pmid= 8486355 |doi= 10.1006/geno.1993.1157 |display-authors=etal}}
 *{{cite journal  | vauthors=Thompson AA, Wood WJ, Gilly MJ |title=The promoter and 5' flanking sequences controlling human B29 gene expression |journal=Blood |volume=87 |issue= 2 |pages= 666–73 |year= 1996 |pmid= 8555489 |doi=  10.1182/blood.V87.2.666.bloodjournal872666|display-authors=etal|doi-access=free }}
 *{{cite journal  | vauthors=Astsaturov IA, Matutes E, Morilla R |title=Differential expression of B29 (CD79b) and mb-1 (CD79a) proteins in acute lymphoblastic leukaemia |journal=Leukemia |volume=10 |issue= 5 |pages= 769–73 |year= 1996 |pmid= 8656670 |display-authors=etal}}
 *{{cite journal  | vauthors=Koyama M, Nakamura T, Higashihara M |title=The novel variants of mb-1 and B29 transcripts generated by alternative mRNA splicing |journal=Immunol. Lett. |volume=47 |issue= 3 |pages= 151–6 |year= 1996 |pmid= 8747711 |doi=10.1016/0165-2478(95)00071-X  |display-authors=etal}}
-*{{cite journal  | vauthors=Carter RH, Doody GM, Bolen JB, Fearon DT |title=Membrane IgM-induced tyrosine phosphorylation of CD19 requires a CD19 domain that mediates association with components of the B cell antigen receptor complex |journal=J. Immunol. |volume=158 |issue= 7 |pages= 3062–9 |year= 1997 |pmid= 9120258 }}
+*{{cite journal  | vauthors=Carter RH, Doody GM, Bolen JB, Fearon DT |title=Membrane IgM-induced tyrosine phosphorylation of CD19 requires a CD19 domain that mediates association with components of the B cell antigen receptor complex |journal=J. Immunol. |volume=158 |issue= 7 |pages= 3062–9 |year= 1997 |doi=10.4049/jimmunol.158.7.3062 |pmid= 9120258 |s2cid=20717278 |doi-access=free }}
 {{refend}}

v t e Proteins: clusters of differentiation (see also list of human clusters of differentiation)
1–50	CD1 a-c 1A 1B 1D 1E CD2 CD3 γ δ ε CD4 CD5 CD6 CD7 CD8 a CD9 CD10 CD11 a b c d CD13 CD14 CD15 CD16 A B CD18 CD19 CD20 CD21 CD22 CD23 CD24 CD25 CD26 CD27 CD28 CD29 CD30 CD31 CD32 A B CD33 CD34 CD35 CD36 CD37 CD38 CD39 CD40 CD41 CD42 a b c d CD43 CD44 CD45 CD46 CD47 CD48 CD49 a b c d e f CD50
51–100	CD51 CD52 CD53 CD54 CD55 CD56 CD57 CD58 CD59 CD61 CD62 E L P CD63 CD64 A B C CD66 a b c d e f CD68 CD69 CD70 CD71 CD72 CD73 CD74 CD78 CD79 a b CD80 CD81 CD82 CD83 CD84 CD85 a d e h j k CD86 CD87 CD88 CD89 CD90 CD91 - CD92 CD93 CD94 CD95 CD96 CD97 CD98 CD99 CD100
101–150	CD101 CD102 CD103 CD104 CD105 CD106 CD107 a b CD108 CD109 CD110 CD111 CD112 CD113 CD114 CD115 CD116 CD117 CD118 CD119 CD120 a b CD121 a b CD122 CD123 CD124 CD125 CD126 CD127 CD129 CD130 CD131 CD132 CD133 CD134 CD135 CD136 CD137 CD138 CD140b CD141 CD142 CD143 CD144 CD146 CD147 CD148 CD150
151–200	CD151 CD152 CD153 CD154 CD155 CD156 a b c CD157 CD158 (a d e i k) CD159 a c CD160 CD161 CD162 CD163 CD164 CD166 CD167 a b CD168 CD169 CD170 CD171 CD172 a b g CD174 CD177 CD178 CD179 a b CD180 CD181 CD182 CD183 CD184 CD185 CD186 CD191 CD192 CD193 CD194 CD195 CD196 CD197 CDw198 CDw199 CD200
201–250	CD201 CD202b CD204 CD205 CD206 CD207 CD208 CD209 CDw210 a b CD212 CD213a 1 2 CD217 CD218 (a b) CD220 CD221 CD222 CD223 CD224 CD225 CD226 CD227 CD228 CD229 CD230 CD233 CD234 CD235 a b CD236 CD238 CD239 CD240CE CD240D CD241 CD243 CD244 CD246 CD247 - CD248 CD249
251–300	CD252 CD253 CD254 CD256 CD257 CD258 CD261 CD262 CD263 CD264 CD265 CD266 CD267 CD268 CD269 CD271 CD272 CD273 CD274 CD275 CD276 CD278 CD279 CD280 CD281 CD282 CD283 CD284 CD286 CD288 CD289 CD290 CD292 CDw293 CD294 CD295 CD297 CD298 CD299
301–350	CD300A CD301 CD302 CD303 CD304 CD305 CD306 CD307 CD309 CD312 CD314 CD315 CD316 CD317 CD318 CD320 CD321 CD322 CD324 CD325 CD326 CD327 CD328 CD329 CD331 CD332 CD333 CD334 CD335 CD336 CD337 CD338 CD339 CD340 CD344 CD349 CD350

CD79B: Difference between revisions

Latest revision as of 07:19, 15 October 2024

See also

References

Further reading

External links