Taxon: Difference between revisions
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{{Short description|Grouping of biological populations}} |
{{Short description|Grouping of biological populations}} |
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{{for |
{{for-multi|the journal|Taxon (journal){{!}}''Taxon'' (journal)|other uses|Taxa (disambiguation)}} |
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[[File:Elephants in Kenya.jpg|thumb|270px|[[African elephant]]s form the [[genus]] ''Loxodonta'', a widely accepted taxon.]] |
[[File:Elephants in Kenya.jpg|thumb|270px|[[African elephant]]s form the [[genus]] ''Loxodonta'', a widely accepted taxon.]] |
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In [[biology]], a '''taxon''' ([[back-formation]] from ''[[Taxonomy (biology)|taxonomy]]''; plural '''taxa''') is a group of one or more populations of an organism or organisms seen by taxonomists to form a unit. Although neither is required, a taxon is usually known by a particular name and given a particular [[Taxonomic rank|ranking]], especially if and when it is accepted or becomes established. It is very common, however, for taxonomists to remain at odds over what belongs to a taxon and the criteria used for inclusion. If a taxon is given a formal [[scientific name]], its use is then governed by one of the [[nomenclature codes]] specifying which scientific name is correct for a particular grouping. |
In [[biology]], a '''taxon''' ([[back-formation]] from ''[[Taxonomy (biology)|taxonomy]]''; {{plural form}}: '''taxa''') is a group of one or more populations of an organism or organisms seen by taxonomists to form a unit. Although neither is required, a taxon is usually known by a particular name and given a particular [[Taxonomic rank|ranking]], especially if and when it is accepted or becomes established. It is very common, however, for taxonomists to remain at odds over what belongs to a taxon and the criteria used for inclusion, especially in the context of rank-based ("[[Linnaean taxonomy|Linnaean]]") nomenclature (much less so under [[phylogenetic nomenclature]]).<ref name="Cantino & de Queiroz 2020">{{cite book |last1=Cantino |first1=Philip D. |last2=de Queiroz |first2=Kevin |title=International Code of Phylogenetic Nomenclature (PhyloCode): A Phylogenetic Code of Biological Nomenclature |date=2000 |publisher=CRC Press |location=Boca Raton, Fl |isbn=0429821352 |pages=xl + 149 |url=https://www.routledge.com/International-Code-of-Phylogenetic-Nomenclature-PhyloCode/Queiroz-Cantino/p/book/9781138332829 |language=en}}</ref> If a taxon is given a formal [[scientific name]], its use is then governed by one of the [[nomenclature codes]] specifying which scientific name is correct for a particular grouping. |
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Initial attempts at classifying and ordering organisms (plants and animals) were presumably set forth in prehistoric times by hunter-gatherers, as suggested by the fairly sophisticated folk taxonomies. Much later, Aristotle, and later still, European scientists, like [[Pierre Magnol|Magnol]],<ref name="Magnol 1689">{{cite book |last1=Magnol |first1=Petrus |title=Prodromus historiae generalis plantarum in quo familiae plantarum per tabulas disponuntur |date=1689 |publisher=Pech |location=Montpellier |pages=79 |url=https://books.google.com/books?id=RShVAAAAcAAJ&dq=Prodromus+historiae+generalis+plantarum+in+quo+familiae+plantarum+per+tabulas+disponuntur&pg=PA1 |language=la}}</ref> [[Joseph Pitton de Tournefort|Tournefort]]<ref name="Tournefort 1694">{{cite book |last1=Tournefort |first1=Joseph Pitton de |title=Elemens de botanique, ou Methode pour connoître les plantes. I. [Texte.] / . Par Mr Pitton Tournefort... [T. I-III] |date=1694 |publisher=L’Imprimerie Royale |location=Paris |pages=562 |url=https://gallica.bnf.fr/ark:/12148/btv1b8454361d/f9.item |language=EN}}</ref> and [[Carl Linnaeus]]'s [[Linnaean taxonomy|system]] in ''[[Systema Naturae]]'', 10th edition (1758),<!-- |
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Initial attempts at classifying and ordering organisms (plants and animals) were set forth in [[Carl Linnaeus]]'s [[Linnaean taxonomy|system]] in ''[[Systema Naturae]]'', 10th edition (1758),<!-- |
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--><ref>{{cite web |last=Quammen |first=David |title=A Passion for Order |publisher=National Geographic Magazine |date=June 2007 |url=http://ngm.nationalgeographic.com/print/2007/06/linnaeus-name-giver/david-quammen-text |access-date=27 April 2013}}</ref><!--ENDRef--> as well as an unpublished work by [[Bernard de Jussieu|Bernard]] and [[Antoine Laurent de Jussieu]]. The idea of a unit-based system of biological classification was first made widely available in 1805 in the introduction of [[Jean-Baptiste Lamarck]]'s ''Flore françoise'', and [[Augustin Pyramus de Candolle]]'s ''Principes élémentaires de botanique''. Lamarck set out a system for the "natural classification" of plants. Since then, [[Systematics|systematists]] continue to construct accurate classifications encompassing the diversity of life; today, a "good" or "useful" taxon is commonly taken to be one that reflects [[Phylogenetics|evolutionary relationships]].{{NoteTag|This is not considered as mandatory, however, as indicated by terms for non-[[Monophyly|monophyletic]] groupings ("invertebrates", "conifers", "fish", etc).}} |
--><ref>{{cite web |last=Quammen |first=David |title=A Passion for Order |publisher=National Geographic Magazine |date=June 2007 |url=http://ngm.nationalgeographic.com/print/2007/06/linnaeus-name-giver/david-quammen-text |archive-url=https://web.archive.org/web/20080827105848/http://ngm.nationalgeographic.com/print/2007/06/linnaeus-name-giver/david-quammen-text |url-status=dead |archive-date=August 27, 2008 |access-date=27 April 2013}}</ref><!--ENDRef-->, as well as an unpublished work by [[Bernard de Jussieu|Bernard]] and [[Antoine Laurent de Jussieu]], contributed to this field. The idea of a unit-based system of biological classification was first made widely available in 1805 in the introduction of [[Jean-Baptiste Lamarck]]'s ''Flore françoise'', and [[Augustin Pyramus de Candolle]]'s ''Principes élémentaires de botanique''. Lamarck set out a system for the "natural classification" of plants. Since then, [[Systematics|systematists]] continue to construct accurate classifications encompassing the diversity of life; today, a "good" or "useful" taxon is commonly taken to be one that reflects [[Phylogenetics|evolutionary relationships]].{{NoteTag|This is not considered as mandatory, however, as indicated by terms for non-[[Monophyly|monophyletic]] groupings ("invertebrates", "conifers", "fish", etc).}} |
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Many modern systematists, such as advocates of [[phylogenetic nomenclature]], use [[Cladistics|cladistic]] methods that require taxa to be [[Monophyly|monophyletic]] (all descendants of some ancestor). |
Many modern systematists, such as advocates of [[phylogenetic nomenclature]], use [[Cladistics|cladistic]] methods that require taxa to be [[Monophyly|monophyletic]] (all descendants of some ancestor). Therefore, their basic unit, the [[clade]], is equivalent to the taxon, assuming that taxa should reflect evolutionary relationships. Similarly, among those contemporary taxonomists working with the traditional Linnean (binomial) nomenclature, few propose taxa they know to be [[Paraphyly|paraphyletic]].<ref>{{cite journal |title=Phylogeny as a Central Principle in Taxonomy: Phylogenetic Definitions of Taxon Names |author=de Queiroz, K & J Gauthier |journal=Systematic Zoology |volume=39 |issue=4 |year=1990 |pages=307–322 |url=http://vertebrates.si.edu/herps/herps_pdfs/deQueiroz_pdfs/1990deQ_GauSZ.pdf |doi=10.2307/2992353 |jstor=2992353}}</ref> An example of a long-established taxon that is not also a clade is the [[Class (biology)|class]] [[Reptile|Reptilia]], the reptiles; birds and mammals are the descendants of animals traditionally classed as reptiles, but neither is included in the Reptilia (birds are traditionally placed in the class [[Bird|Aves]], and mammals in the class [[Mammal]]ia).<ref name=Romer>{{cite book |last=Romer |first=A. S. |orig-year=1949 |title=The Vertebrate Body |publisher=W.B. Saunders |year=1970 |edition=4th}}</ref> |
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== History == |
== History == |
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The term ''taxon'' was first used in 1926 by [[:de:Adolf Meyer-Abich|Adolf Meyer-Abich]] for animal groups, as a [[back-formation]] from the word ''[[taxonomy (biology)|taxonomy]]''; the word ''taxonomy'' had been coined a century before from the Greek components {{ |
The term ''taxon'' was first used in 1926 by [[:de:Adolf Meyer-Abich|Adolf Meyer-Abich]] for animal groups, as a [[back-formation]] from the word ''[[taxonomy (biology)|taxonomy]]''; the word ''taxonomy'' had been coined a century before from the Greek components {{Wikt-lang|grc|τάξις}} ([[wikt:taxo-|{{grc-transl|τάξις}}]]), meaning "arrangement", and {{Wikt-lang|grc|νόμος}} ([[wikt:-nomy|{{grc-transl|νόμος}}]]), meaning "[[scientific method|method]]".<ref name="AdnetSenut2013">{{cite book |author1=Sylvain Adnet |url=https://books.google.com/books?id=SUz8AAAAQBAJ&pg=PA122 |title=Principes de paléontologie |author2=[[Brigitte Senut]] |author3=Thierry Tortosa |author4=Romain Amiot, Julien Claude, Sébastien Clausen, Anne-Laure Decombeix, Vincent Fernandez, Grégoire Métais, Brigitte Meyer-Berthaud, Serge Muller |date=25 September 2013 |publisher=Dunod |isbn=978-2-10-070313-5 |pages=122 |quote=La taxinomie s'enrichit avec l'invenition du mot «taxon» par Adolf Meyer-Abich, naturaliste allemand, dans sa Logik der morphologie, im Rahmen einer Logik der gesamten Biologie (1926) [Translation: Taxonomy is enriched by the invention of the word "taxon" by Adolf Meyer-Abich, German naturalist, in his Logik der morphologie, im Rahmen einer Logik der gesamten Biologie (1926).]}}</ref><ref name="Meyer">{{cite book |last=Meyer-Abich|first=Adolf |title=Logik der Morphologie im Rahmen einer Logik der gesamten Biologie |url=https://books.google.com/books?id=C8miBgAAQBAJ&pg=PA127 |year=1926 |publisher=[[Springer Science+Business Media|Springer-Verlag]] |isbn=978-3-642-50733-5 |page=127}}</ref> For plants, it was proposed by [[Herman Johannes Lam]] in 1948, and it was adopted at the VII [[International Botanical Congress]], held in 1950.<ref>{{cite book |last=Naik|first=V. N. |year=1984 |title=Taxonomy of Angiosperms |publisher=[[McGraw Hill Education|Tata McGraw Hill]] |location=[[New Delhi]] |page=2}}</ref> |
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== Definition == |
== Definition == |
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== Ranks == |
== Ranks == |
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{{Unreferenced section | date = January 2024}} |
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{{Biological classification}} |
{{Biological classification}} |
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A taxon can be assigned a [[taxonomic rank]], usually (but not necessarily) when it is given a formal name. |
A taxon can be assigned a [[taxonomic rank]], usually (but not necessarily) when it is given a formal name.{{Citation needed|date=January 2024}} |
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"[[Phylum]]" applies formally to any biological [[domain (biology)|domain]], but traditionally it was always used for animals, whereas "division" was traditionally often used for [[plant]]s, [[fungus|fungi]], etc. |
"[[Phylum]]" applies formally to any biological [[domain (biology)|domain]], but traditionally it was always used for animals, whereas "division" was traditionally often used for [[plant]]s, [[fungus|fungi]], etc.{{Citation needed|date=January 2024}} |
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A prefix is used to indicate a ranking of lesser importance. The prefix ''super-'' indicates a rank above, the prefix ''sub-'' indicates a rank below. In [[zoology]], the prefix ''infra-'' indicates a rank below ''sub-''. For instance, among the additional ranks of [[Class (biology)|class]] are superclass, subclass and infraclass. |
A prefix is used to indicate a ranking of lesser importance. The prefix ''super-'' indicates a rank above, the prefix ''sub-'' indicates a rank below. In [[zoology]], the prefix ''infra-'' indicates a rank below ''sub-''. For instance, among the additional ranks of [[Class (biology)|class]] are superclass, subclass and infraclass.{{Citation needed|date=January 2024}} |
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Rank is relative, and restricted to a particular systematic schema. For example, [[Marchantiophyta|liverworts]] have been grouped, in various systems of classification, as a family, order, class, or division (phylum). The use of a narrow set of ranks is challenged by users of [[cladistics]]; for example, the mere 10 ranks traditionally used between animal families (governed by the [[ |
Rank is relative, and restricted to a particular systematic schema. For example, [[Marchantiophyta|liverworts]] have been grouped, in various systems of classification, as a family, order, class, or division (phylum). The use of a narrow set of ranks is challenged by users of [[cladistics]]; for example, the mere 10 ranks traditionally used between animal families (governed by the [[International Code of Zoological Nomenclature]] (ICZN)) and animal phyla (usually the highest relevant rank in taxonomic work) often cannot adequately represent the evolutionary history as more about a lineage's [[phylogeny]] becomes known.{{Citation needed|date=January 2024}} |
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In addition, the class rank is quite often not an evolutionary but a [[phenetic]] or [[paraphyletic]] group and as opposed to those ranks governed by the ICZN (family-level, genus-level and [[species]]-level taxa), can usually not be made monophyletic by exchanging the taxa contained therein. This has given rise to [[phylogenetic taxonomy]] and the ongoing development of the ''[[PhyloCode]]'', which has been proposed as a new alternative to replace Linnean classification and govern the application of names to [[clade]]s. Many cladists do not see any need to depart from traditional nomenclature as governed by the ICZN, [[International Code of Nomenclature for algae, fungi, and plants]], etc. |
In addition, the class rank is quite often not an evolutionary but a [[phenetic]] or [[paraphyletic]] group and as opposed to those ranks governed by the ICZN (family-level, genus-level and [[species]]-level taxa), can usually not be made monophyletic by exchanging the taxa contained therein. This has given rise to [[phylogenetic taxonomy]] and the ongoing development of the ''[[PhyloCode]]'', which has been proposed as a new alternative to replace Linnean classification and govern the application of names to [[clade]]s. Many cladists do not see any need to depart from traditional nomenclature as governed by the ICZN, [[International Code of Nomenclature for algae, fungi, and plants]], etc.{{Citation needed|date=January 2024}} |
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== See also == |
== See also == |
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* [[Segregate (taxonomy)]] |
* [[Segregate (taxonomy)]] |
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* [[Virus classification]] |
* [[Virus classification]] |
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* [[Wastebasket taxon]] |
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== Notes == |
== Notes == |
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* {{Wiktionary-inline}} |
* {{Wiktionary-inline}} |
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{{ |
{{Clear}} |
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{{Evolution}} |
{{Evolution}} |
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{{Authority control}} |
{{Authority control}} |
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[[Category:Organisms]] |
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[[Category:Taxa| ]] |
[[Category:Taxa| ]] |
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[[Category:Biological classification]] |
[[Category:Biological classification]] |
Latest revision as of 23:40, 18 November 2024
In biology, a taxon (back-formation from taxonomy; pl.: taxa) is a group of one or more populations of an organism or organisms seen by taxonomists to form a unit. Although neither is required, a taxon is usually known by a particular name and given a particular ranking, especially if and when it is accepted or becomes established. It is very common, however, for taxonomists to remain at odds over what belongs to a taxon and the criteria used for inclusion, especially in the context of rank-based ("Linnaean") nomenclature (much less so under phylogenetic nomenclature).[1] If a taxon is given a formal scientific name, its use is then governed by one of the nomenclature codes specifying which scientific name is correct for a particular grouping.
Initial attempts at classifying and ordering organisms (plants and animals) were presumably set forth in prehistoric times by hunter-gatherers, as suggested by the fairly sophisticated folk taxonomies. Much later, Aristotle, and later still, European scientists, like Magnol,[2] Tournefort[3] and Carl Linnaeus's system in Systema Naturae, 10th edition (1758),[4], as well as an unpublished work by Bernard and Antoine Laurent de Jussieu, contributed to this field. The idea of a unit-based system of biological classification was first made widely available in 1805 in the introduction of Jean-Baptiste Lamarck's Flore françoise, and Augustin Pyramus de Candolle's Principes élémentaires de botanique. Lamarck set out a system for the "natural classification" of plants. Since then, systematists continue to construct accurate classifications encompassing the diversity of life; today, a "good" or "useful" taxon is commonly taken to be one that reflects evolutionary relationships.[note 1]
Many modern systematists, such as advocates of phylogenetic nomenclature, use cladistic methods that require taxa to be monophyletic (all descendants of some ancestor). Therefore, their basic unit, the clade, is equivalent to the taxon, assuming that taxa should reflect evolutionary relationships. Similarly, among those contemporary taxonomists working with the traditional Linnean (binomial) nomenclature, few propose taxa they know to be paraphyletic.[5] An example of a long-established taxon that is not also a clade is the class Reptilia, the reptiles; birds and mammals are the descendants of animals traditionally classed as reptiles, but neither is included in the Reptilia (birds are traditionally placed in the class Aves, and mammals in the class Mammalia).[6]
History
[edit]The term taxon was first used in 1926 by Adolf Meyer-Abich for animal groups, as a back-formation from the word taxonomy; the word taxonomy had been coined a century before from the Greek components τάξις (táxis), meaning "arrangement", and νόμος (nómos), meaning "method".[7][8] For plants, it was proposed by Herman Johannes Lam in 1948, and it was adopted at the VII International Botanical Congress, held in 1950.[9]
Definition
[edit]The glossary of the International Code of Zoological Nomenclature (1999) defines[10] a
- "taxon, (pl. taxa), n.
- A taxonomic unit, whether named or not: i.e. a population, or group of populations of organisms which are usually inferred to be phylogenetically related and which have characters in common which differentiate (q.v.) the unit (e.g. a geographic population, a genus, a family, an order) from other such units. A taxon encompasses all included taxa of lower rank (q.v.) and individual organisms. [...]"
Ranks
[edit]A taxon can be assigned a taxonomic rank, usually (but not necessarily) when it is given a formal name.[citation needed]
"Phylum" applies formally to any biological domain, but traditionally it was always used for animals, whereas "division" was traditionally often used for plants, fungi, etc.[citation needed]
A prefix is used to indicate a ranking of lesser importance. The prefix super- indicates a rank above, the prefix sub- indicates a rank below. In zoology, the prefix infra- indicates a rank below sub-. For instance, among the additional ranks of class are superclass, subclass and infraclass.[citation needed]
Rank is relative, and restricted to a particular systematic schema. For example, liverworts have been grouped, in various systems of classification, as a family, order, class, or division (phylum). The use of a narrow set of ranks is challenged by users of cladistics; for example, the mere 10 ranks traditionally used between animal families (governed by the International Code of Zoological Nomenclature (ICZN)) and animal phyla (usually the highest relevant rank in taxonomic work) often cannot adequately represent the evolutionary history as more about a lineage's phylogeny becomes known.[citation needed]
In addition, the class rank is quite often not an evolutionary but a phenetic or paraphyletic group and as opposed to those ranks governed by the ICZN (family-level, genus-level and species-level taxa), can usually not be made monophyletic by exchanging the taxa contained therein. This has given rise to phylogenetic taxonomy and the ongoing development of the PhyloCode, which has been proposed as a new alternative to replace Linnean classification and govern the application of names to clades. Many cladists do not see any need to depart from traditional nomenclature as governed by the ICZN, International Code of Nomenclature for algae, fungi, and plants, etc.[citation needed]
See also
[edit]- ABCD Schema
- Alpha taxonomy
- Chresonym
- Cladistics
- Folk taxonomy
- Ichnotaxon
- International Code of Nomenclature for algae, fungi, and plants
- International Code of Zoological Nomenclature (ICZN)
- List of taxa named by anagrams
- Rank (botany)
- Rank (zoology)
- Segregate (taxonomy)
- Virus classification
- Wastebasket taxon
Notes
[edit]- ^ This is not considered as mandatory, however, as indicated by terms for non-monophyletic groupings ("invertebrates", "conifers", "fish", etc).
References
[edit]- ^ Cantino, Philip D.; de Queiroz, Kevin (2000). International Code of Phylogenetic Nomenclature (PhyloCode): A Phylogenetic Code of Biological Nomenclature. Boca Raton, Fl: CRC Press. pp. xl + 149. ISBN 0429821352.
- ^ Magnol, Petrus (1689). Prodromus historiae generalis plantarum in quo familiae plantarum per tabulas disponuntur (in Latin). Montpellier: Pech. p. 79.
- ^ Tournefort, Joseph Pitton de (1694). Elemens de botanique, ou Methode pour connoître les plantes. I. [Texte.] / . Par Mr Pitton Tournefort... [T. I-III]. Paris: L’Imprimerie Royale. p. 562.
- ^ Quammen, David (June 2007). "A Passion for Order". National Geographic Magazine. Archived from the original on August 27, 2008. Retrieved 27 April 2013.
- ^ de Queiroz, K & J Gauthier (1990). "Phylogeny as a Central Principle in Taxonomy: Phylogenetic Definitions of Taxon Names" (PDF). Systematic Zoology. 39 (4): 307–322. doi:10.2307/2992353. JSTOR 2992353.
- ^ Romer, A. S. (1970) [1949]. The Vertebrate Body (4th ed.). W.B. Saunders.
- ^ Sylvain Adnet; Brigitte Senut; Thierry Tortosa; Romain Amiot, Julien Claude, Sébastien Clausen, Anne-Laure Decombeix, Vincent Fernandez, Grégoire Métais, Brigitte Meyer-Berthaud, Serge Muller (25 September 2013). Principes de paléontologie. Dunod. p. 122. ISBN 978-2-10-070313-5.
La taxinomie s'enrichit avec l'invenition du mot «taxon» par Adolf Meyer-Abich, naturaliste allemand, dans sa Logik der morphologie, im Rahmen einer Logik der gesamten Biologie (1926) [Translation: Taxonomy is enriched by the invention of the word "taxon" by Adolf Meyer-Abich, German naturalist, in his Logik der morphologie, im Rahmen einer Logik der gesamten Biologie (1926).]
{{cite book}}
: CS1 maint: multiple names: authors list (link) - ^ Meyer-Abich, Adolf (1926). Logik der Morphologie im Rahmen einer Logik der gesamten Biologie. Springer-Verlag. p. 127. ISBN 978-3-642-50733-5.
- ^ Naik, V. N. (1984). Taxonomy of Angiosperms. New Delhi: Tata McGraw Hill. p. 2.
- ^ ICZN (1999) International Code of Zoological Nomenclature. Glossary Archived 2005-01-03 at the Wayback Machine. International Commission on Zoological Nomenclature.
External links
[edit]- The dictionary definition of taxon at Wiktionary