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== Browsing Ensembl Genomes ==
== Browsing Ensembl Genomes ==
[[File:Anopheles_gambiae_Ensembl_Genomes.png|thumb|left|Result page for a species search using Ensembl Genomes]]
[[File:Anopheles_gambiae_Ensembl_Genomes.png|thumb|left|Result page for a species search using Ensembl Genomes]]
Ensembl Genome allows to find genome data using [[gene]] name, [[gene]] symbol, [[Accession number (bioinformatics)|accession number]] or the [[Structural variation|Variant]] ID. Genome search by species is also possible. Searching for a particular species using Ensembl Genomes redirects to a new page in which all the tools and information available for the species are displayed.
Ensembl Genome allows to find genome data using [[gene]] name, [[gene]] symbol, [[Accession number (bioinformatics)|accession number]] or the [[Structural variation|Variant]] ID. Genome search by species is also possible. Searching for a particular species using Ensembl Genomes redirects to a new page in which all the tools and information available for the species are shown.


== Current species ==
== Current species ==
Line 45: Line 45:
* 45 [[fungus|fungi]] [http://fungi.ensembl.org]
* 45 [[fungus|fungi]] [http://fungi.ensembl.org]


== Collaborations ==
Ensembl Genomes continuously expands the annotation data through collaboration with other organisations involved in genome annotation projects and research. The following organisations are collaborators of Ensembl Genomes<ref>{{cite web|title=Collaborators - Ensembl Genomes|url=http://ensemblgenomes.org/info/about/collaborations|website=http://ensemblgenomes.org/info/about/collaborations|publisher=Ensembl Genomes|accessdate=3 September 2014|language=English}}</ref>:

*[[AllBio]]
*[[Barley]]
*[[Culicoides sonorensis]]
*[[Gramene]]
*[[INFRAVEC]]
*[[Microme]]
*[[PomBase]]
*[[PhytoPath]]
*[[transPLANT]]
*[[Triticeae Genomics for Sustainable Agriculture]]
*[[VectorBase]]
*[[[Wheat Rust Genomic Improvement]]
*[[WormBase]]
*[[WormBase ParaSite]]
== See also ==
== See also ==
* [[Ensembl]]
* [[Ensembl]]

Revision as of 08:34, 3 September 2014

Ensembl Genomes
Content
DescriptionAn integrative resource for genome-scale data from non-vertebrate species.
Data types
captured		Genomic database
Organismspan
Contact
Research centerEuropean Bioinformatics Institute
Primary citationKersey & al. (2012)[1]
Release date2009
Access
Websitehttp://ensemblgenomes.org/
Miscellaneous
Data release
frequency		4/5 times per year
VersionRelease 23 (July 2013)

Ensembl Genomes is a scientific project to provide genome-scale data from non-vertebrate species .[1] The project is run by the European Bioinformatics Institute, and was launched in 2009 using the Ensembl technology .[2] The main objective of the Ensembl Genomes database is to complement the main Ensembl database by introducing five additional web pages to include genome data for bacteria, fungi, invertebrate metazoa, plants, and protists.[3] For each of the domains, the Ensembl tools are available for manipulation, analysis and visualization of genome data.

Browsing Ensembl Genomes

File:Anopheles gambiae Ensembl Genomes.png
Result page for a species search using Ensembl Genomes

Ensembl Genome allows to find genome data using gene name, gene symbol, accession number or the Variant ID. Genome search by species is also possible. Searching for a particular species using Ensembl Genomes redirects to a new page in which all the tools and information available for the species are shown.

Current species

Collaborations

Ensembl Genomes continuously expands the annotation data through collaboration with other organisations involved in genome annotation projects and research. The following organisations are collaborators of Ensembl Genomes[4]:

See also

References

  1. ^ a b Template:Cite PMID
  2. ^ Template:Cite PMID
  3. ^ "About Ensembl Genomes". http://ensemblgenomes.org/info/about. Ensembl. Retrieved 2 September 2014. {{cite web}}: External link in |website= (help)
  4. ^ "Collaborators - Ensembl Genomes". http://ensemblgenomes.org/info/about/collaborations. Ensembl Genomes. Retrieved 3 September 2014. {{cite web}}: External link in |website= (help)
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