Exafroplacentalia: Difference between revisions
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| taxon = Exafroplacentalia |
| taxon = Exafroplacentalia |
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| authority = Waddell et al, 2001 |
| authority = Waddell et al, 2001<ref name="Waddell2001" /> |
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| subdivision_ranks = Subgroups |
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'''Exafroplacentalia''' or '''Notolegia''' is a [[clade]] of [[Placentalia|placental mammals]] proposed in 2001 on the basis of molecular research.<ref>Murphy, W.J., Pringle, T.H., Crider, T.A., Springer, M.S. & Miller, W. 2007. Using genomic data to unravel the root of the placental mammal phylogeny. Genome Research 17, pp.413-421.</ref><ref>Kriegs, J.O., Churakov, G., Kiefmann, M., Jordan, U., Brosius, J. & Schmitz, J. 2006. Retroposed elements as archives for the evolutionary history of placental mammals. Plos Biol 4, pp.e91.</ref> |
'''Exafroplacentalia''' or '''Notolegia''' is a [[clade]] of [[Placentalia|placental mammals]] proposed in 2001 on the basis of molecular research.<ref name="Waddell2001">{{Cite journal | last1 = Waddell | first1 = Peter J. | last2 = Kishino | first2 = Hirohisa | last3 = Ota | first3 = Rissa | title = A phylogenetic foundation for comparative mammalian genomics | journal = [[Genome Informatics]] | volume = 12 | pages = 141–154 | year = 2001 | pmid = 11791233 | doi = 10.11234/gi1990.12.141 | url = http://www.jsbi.org/pdfs/journal1/GIW01/GIW01F15.html}}</ref><ref>Murphy, W.J., Pringle, T.H., Crider, T.A., Springer, M.S. & Miller, W. 2007. Using genomic data to unravel the root of the placental mammal phylogeny. Genome Research 17, pp.413-421.</ref><ref>Kriegs, J.O., Churakov, G., Kiefmann, M., Jordan, U., Brosius, J. & Schmitz, J. 2006. Retroposed elements as archives for the evolutionary history of placental mammals. Plos Biol 4, pp.e91.</ref> |
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Exafroplacentalia places [[Xenarthra]] as a sister group to the [[Boreoeutheria]] (comprising [[Laurasiatheria]] and [[Euarchontoglires]]),<ref>{{Cite journal| doi = 10.1111/j.1096-0031.2009.00255.x| title = Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups| year = 2009| last1 = Goloboff | first1 = Pablo A.| last2 = Catalano | first2 = Santiago A.| last3 = Mirande | first3 = J. Marcos| last4 = Szumik | first4 = Claudia A.| last5 = Arias | first5 = J. Salvador| last6 = Källersjö | first6 = Mari| last7 = Farris | first7 = James S.| journal = [[Cladistics (journal)|Cladistics]]| volume = 25| issue = 3| pages = 211–230 | pmid = 34879616| doi-access = free}}</ref> thus making Afrotheria a primitive group of placental mammals (the group name roughly means "those which are not African placentals"). |
Exafroplacentalia places [[Xenarthra]] as a sister group to the [[Boreoeutheria]] (comprising [[Laurasiatheria]] and [[Euarchontoglires]]),<ref>{{Cite journal| doi = 10.1111/j.1096-0031.2009.00255.x| title = Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups| year = 2009| last1 = Goloboff | first1 = Pablo A.| last2 = Catalano | first2 = Santiago A.| last3 = Mirande | first3 = J. Marcos| last4 = Szumik | first4 = Claudia A.| last5 = Arias | first5 = J. Salvador| last6 = Källersjö | first6 = Mari| last7 = Farris | first7 = James S.| journal = [[Cladistics (journal)|Cladistics]]| volume = 25| issue = 3| pages = 211–230 | pmid = 34879616| doi-access = free}}</ref> thus making Afrotheria a primitive group of placental mammals (the group name roughly means "those which are not African placentals"). |
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* {{Cite journal | last1 = Nikolaev | first1 = Sergey| last2 = Montoya-Burgos | first2 = Juan I.| last3 = Margulies | first3 = Elliott H.| author4 = NISC Comparative Sequencing Program| last5 = Rougemont | first5 = Jacques| last6 = Nyffeler | first6 = Bruno| last7 = Antonarakis | first7 = Stylianos E.| doi = 10.1371/journal.pgen.0030002 | title = Early History of Mammals is Elucidated with the ENCODE Multiple Species Sequencing Data | journal = [[PLOS Genetics|PLoS Genetics]]| volume = 3 | issue = 1 | pages = e2 | year = 2007 | pmid = 17206863| pmc = 1761045}} |
* {{Cite journal | last1 = Nikolaev | first1 = Sergey| last2 = Montoya-Burgos | first2 = Juan I.| last3 = Margulies | first3 = Elliott H.| author4 = NISC Comparative Sequencing Program| last5 = Rougemont | first5 = Jacques| last6 = Nyffeler | first6 = Bruno| last7 = Antonarakis | first7 = Stylianos E.| doi = 10.1371/journal.pgen.0030002 | title = Early History of Mammals is Elucidated with the ENCODE Multiple Species Sequencing Data | journal = [[PLOS Genetics|PLoS Genetics]]| volume = 3 | issue = 1 | pages = e2 | year = 2007 | pmid = 17206863| pmc = 1761045}} |
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* {{Cite journal | last1 = Springer | first1 = Mark S.| last2 = Murphy | first2 = William J.| last3 = Eizirik | first3 = Eduardo| last4 = O'Brien | first4 = Stephen J.| title = Placental mammal diversification and the Cretaceous–Tertiary boundary | doi = 10.1073/pnas.0334222100 | journal = [[Proceedings of the National Academy of Sciences of the United States of America|Proceedings of the National Academy of Sciences]]| volume = 100 | issue = 3 | pages = 1056–1061 | year = 2003 | pmid = 12552136| pmc = 298725| doi-access = free}} |
* {{Cite journal | last1 = Springer | first1 = Mark S.| last2 = Murphy | first2 = William J.| last3 = Eizirik | first3 = Eduardo| last4 = O'Brien | first4 = Stephen J.| title = Placental mammal diversification and the Cretaceous–Tertiary boundary | doi = 10.1073/pnas.0334222100 | journal = [[Proceedings of the National Academy of Sciences of the United States of America|Proceedings of the National Academy of Sciences]]| volume = 100 | issue = 3 | pages = 1056–1061 | year = 2003 | pmid = 12552136| pmc = 298725| doi-access = free}} |
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* {{Cite journal |
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| last1 = Waddell | first1 = Peter J. |
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| last2 = Kishino | first2 = Hirohisa |
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| last3 = Ota | first3 = Rissa |
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| title = A phylogenetic foundation for comparative mammalian genomics |
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| journal = [[Genome Informatics]] |
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| volume = 12 |
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| pages = 141–154 |
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| year = 2001 |
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| pmid = 11791233 |
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| url = http://www.jsbi.org/pdfs/journal1/GIW01/GIW01F15.html |
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}} |
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* {{Cite journal | last1 = Wildman | first1 = Derek E.| last2 = Chen | first2 = Caoyi| last3 = Erez | first3 = Offer| last4 = Grossman | first4 = Lawrence I.| last5 = Goodman | first5 = Morris| last6 = Romero | first6 = Roberto| title = Evolution of the mammalian placenta revealed by phylogenetic analysis | doi = 10.1073/pnas.0511344103 | journal = [[Proceedings of the National Academy of Sciences of the United States of America|Proceedings of the National Academy of Sciences]]| volume = 103 | issue = 9 | pages = 3203–3208 | year = 2006 | pmid = 16492730| pmc = 1413940| doi-access = free}} |
* {{Cite journal | last1 = Wildman | first1 = Derek E.| last2 = Chen | first2 = Caoyi| last3 = Erez | first3 = Offer| last4 = Grossman | first4 = Lawrence I.| last5 = Goodman | first5 = Morris| last6 = Romero | first6 = Roberto| title = Evolution of the mammalian placenta revealed by phylogenetic analysis | doi = 10.1073/pnas.0511344103 | journal = [[Proceedings of the National Academy of Sciences of the United States of America|Proceedings of the National Academy of Sciences]]| volume = 103 | issue = 9 | pages = 3203–3208 | year = 2006 | pmid = 16492730| pmc = 1413940| doi-access = free}} |
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Revision as of 14:14, 19 January 2023
Exafroplacentalia | |
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Scientific classification | |
Domain: | Eukaryota |
Kingdom: | Animalia |
Phylum: | Chordata |
Class: | Mammalia |
Infraclass: | Placentalia |
Clade: | Exafroplacentalia Waddell et al, 2001[1] |
Subgroups | |
|
Exafroplacentalia or Notolegia is a clade of placental mammals proposed in 2001 on the basis of molecular research.[1][2][3]
Exafroplacentalia places Xenarthra as a sister group to the Boreoeutheria (comprising Laurasiatheria and Euarchontoglires),[4] thus making Afrotheria a primitive group of placental mammals (the group name roughly means "those which are not African placentals").
Classification
Eutheria |
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However, this classification makes the autapomorphy (character shared only among Exafroplacentalia) dubious: it is hard to classify a group by the absence of a feature (in this case "not coming from Africa").[5] Hence, several alternative hypotheses can be considered.
Alternative hypotheses
One alternative hypothesis is the Epitheria hypothesis:
Another alternative hypothesis is the Atlantogenata hypothesis:
Updated analysis of transposable element insertions around the time of divergence strongly supports the fourth hypothesis of a near-concomitant origin of the three superorders of mammals:[5]
See also
References
- ^ a b Waddell, Peter J.; Kishino, Hirohisa; Ota, Rissa (2001). "A phylogenetic foundation for comparative mammalian genomics". Genome Informatics. 12: 141–154. doi:10.11234/gi1990.12.141. PMID 11791233.
- ^ Murphy, W.J., Pringle, T.H., Crider, T.A., Springer, M.S. & Miller, W. 2007. Using genomic data to unravel the root of the placental mammal phylogeny. Genome Research 17, pp.413-421.
- ^ Kriegs, J.O., Churakov, G., Kiefmann, M., Jordan, U., Brosius, J. & Schmitz, J. 2006. Retroposed elements as archives for the evolutionary history of placental mammals. Plos Biol 4, pp.e91.
- ^ Goloboff, Pablo A.; Catalano, Santiago A.; Mirande, J. Marcos; Szumik, Claudia A.; Arias, J. Salvador; Källersjö, Mari; Farris, James S. (2009). "Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups". Cladistics. 25 (3): 211–230. doi:10.1111/j.1096-0031.2009.00255.x. PMID 34879616.
- ^ a b Nishihara, H., Maruyama, S. & Okada, N. 2009. Retroposon analysis and recent geological data suggest near-simultaneous divergence of the three superorders of placental mammals. PNAS 106: 5235-40.
Further reading
- Churakov, G.; Kriegs, J. O.; Baertsch, R.; Zemann, A.; Brosius, J. R.; Schmitz, J. R. (2009). "Mosaic retroposon insertion patterns in placental mammals". Genome Research. 19 (5): 868–875. doi:10.1101/gr.090647.108. PMC 2675975. PMID 19261842.
- Nikolaev, Sergey; Montoya-Burgos, Juan I.; Margulies, Elliott H.; NISC Comparative Sequencing Program; Rougemont, Jacques; Nyffeler, Bruno; Antonarakis, Stylianos E. (2007). "Early History of Mammals is Elucidated with the ENCODE Multiple Species Sequencing Data". PLoS Genetics. 3 (1): e2. doi:10.1371/journal.pgen.0030002. PMC 1761045. PMID 17206863.
{{cite journal}}
: CS1 maint: unflagged free DOI (link) - Springer, Mark S.; Murphy, William J.; Eizirik, Eduardo; O'Brien, Stephen J. (2003). "Placental mammal diversification and the Cretaceous–Tertiary boundary". Proceedings of the National Academy of Sciences. 100 (3): 1056–1061. doi:10.1073/pnas.0334222100. PMC 298725. PMID 12552136.
- Wildman, Derek E.; Chen, Caoyi; Erez, Offer; Grossman, Lawrence I.; Goodman, Morris; Romero, Roberto (2006). "Evolution of the mammalian placenta revealed by phylogenetic analysis". Proceedings of the National Academy of Sciences. 103 (9): 3203–3208. doi:10.1073/pnas.0511344103. PMC 1413940. PMID 16492730.