Human genetics

"Human Genetics" redirects here. For the journal, see Human Genetics (journal).

For a non-technical introduction to the topic, see Introduction to Genetics.

File:Human genetics.jpg

A small piece of human DNA

Human genetics describes the study of inheritance as it occurs in human beings. Human genetics encompasses a variety of overlapping fields including: classical genetics, cytogenetics, molecular genetics, biochemical genetics, genomics, population genetics, developmental genetics, clinical genetics, and genetic counseling. Genes can be the common factor of the qualities of most human-inherited traits. Study of human genetics can be useful as it can answer questions about human nature, understand the diseases and development of effective disease treatment, and understand genetics of human life. This article describes only basic features of human genetics; for the genetics of disorders please see: Medical genetics.

Genetic differences and inheritance patterns

Inheritance of traits for humans are based upon Gregor Mendel's model of inheritance. Mendel deduced that inheritance depends upon discrete units of inheritance, called factors or genes.

Autosomal dominant inheritance

Autosomal traits are associated with a single gene on an autosome (non-sex chromosome)—they are called "dominant" because a single copy—inherited from either parent—is enough to cause this trait to appear. This often means that one of the parents must also have the same trait, unless it has arisen due to a new mutation. Examples of autosomal dominant traits and disorders are Huntington's disease, and achondroplasia.

Autosomal recessive inheritance

Autosomal recessive traits is one pattern of inheritance for a trait, disease, or disorder to be passed on through families. For a recessive trait or disease to be displayed two copies of the trait or disorder needs to be presented. The trait or gene will be located on a non-sex chromosome. Because it takes two copies of a trait to display a trait, many people can unknowingly be carriers of a disease. From an evolutionary perspective, a recessive disease or trait can remain hidden for several generations before displaying the phenotype. Examples of autosomal recessive disorders are albinism, Cystic Fibrosis, Tay-Sachs disease.

X-linked and Y-linked inheritance

X-linked genes are found on the sex X chromosome. X-linked genes just like autosomal genes have both dominant and recessive types. Recessive X-linked disorders are rarely seen in females and usually only affect males. This is because males inherit their X chromosome and all X-linked genes will be inherited from the maternal side. Fathers only pass on their Y chromosome to their sons, so no X-linked traits will be inherited from father to son. Females express X-linked disorders when they are homozygous for the disorder and become carriers when they are heterozygous. An infamous recessive X-linked disorder is Hemophilia A. Hemophilia is a disorder where blood does not clot properly due to a shortage of clotting factor VIII. This disorder gained recognition as it traveled through royal families, notably the descendent's of Britain's Queen Victoria. X-linked dominant inheritance will show the same phenotype as a heterozygote and homozygote. Just like X-linked inheritance, there will be a lack of male-to-male inheritance, which makes it distinguishable from autosomal traits. One example of a X-linked trait is Coffin-Lowry syndrome, which is caused by a mutation in ribosomal protein gene. This mutation results in skeletal, craniofacial abnormalities, mental retardation, and short stature.

X chromosomes in females undergo a process known as X inactivation. X inactivation is when one of the two X chromosomes in females is almost completely inactivated. It is important that this process occurs otherwise a woman would produce twice the amount of normal X chromosome proteins. The mechanism for X inactivation will occur during the embryonic stage. For people with disorders like trisomy X, where the genotype has three X chromosomes, X-inactivation will inactivate all X chromosomes until there is only one X chromosome active. X inactivation is not only limited to females, males with Klinefelter syndrome, who have an extra X chromosome, will also undergo X inactivation to have only one completely active X chromosome.

Y-linked inheritance occurs when a gene, trait, or disorder is transferred through the Y chromosome. Since Y chromosomes can only be found in males, Y linked traits are only passed on from father to son. The testis determining factor, which is located on the Y chromosome, determines the maleness of individuals. Besides the maleness inherited in the Y-chromosome there are no other found Y-linked characteristics.

Pedigrees

An example of a family pedigree displaying an autosomal recessive trait

A pedigree is a diagram showing the ancestral relationships and transmission of genetic traits over several generations in a family. Pedigrees are used to help detect many different genetic diseases. A pedigree can also be used to help determine the chances for a parent to produce an offspring with a specific trait. Four different traits can be identified by pedigree chart analysis: autosomal dominant, autosomal recessive, x-linked, or y-linked. Partial penetrance can be shown and calculated form pedigrees. Penetrance is the percentage expressed frequency with which individuals of a given genotype manifest at least some degree of a specific mutant phenotype associated with a trait. Inbreeding, the mating between closely related organisms of traits can clearly be seen on pedigree charts. Pedigree charts of royal families have a high degree of inbreeding, because it was customary and preferable for royalty to marry another member of royalty. Genetic councilors commonly use pedigrees to help couple determine if the parents will be able to produce healthy children.

A karyotype of a human male, showing 46 chromosomes including XY sex chromosomes.

Karyotype

A karyotype is a very useful tool in cytogenetics. A karyotype is picture of all the chromosomes in the metaphase stage arranged according to length and centromere position. A karyotype can also be useful in clinical genetics, due to its ability to diagnose genetic disorders. On a normal karyotype, aneuploidy can be detected by clearly being able to observe any missing or extra chromosomes. Giemsa banding, g-banding, of the karyotype can be used to detect deletions, insertions, duplications, inversions, and translocations. G-banding will stain the chromosomes with light and dark bands unique to each chromosome. A FISH, fluorescent in situ hybridization, can be used to observe deletions, insertions, and translocations. FISH uses fluorescent probes to bind to specific sequences of the chromosomes that will cause the chromosomes to fluoresce a unique color.

Genomics

Genomics refers to the field of genetics concerned with structural and functional studies of the genome. A genome is all the DNA contained within an organism or a cell including nuclear and mitochondrial DNA. The human genome is the total collection of genes in a human being contained in the human chromosome, composed of over three billion nucleotides. In April 2003, the Human Genome Project was able to sequence all the DNA in the human genome, to discover the human genome was composed around 20,000 protein coding genes.

Population genetics

Population genetics is the branch of evolutionary biology responsible for investigating processes that cause changes in allele and genotype frequencies in populations based upon Mendelian inheritance. Four different forces can influence the frequencies: natural selection, mutation, gene flow (migration), and genetic drift. A population can be defined as a group of interbreeding individuals and their offspring. For human genetics the populations will consist only of the human species. The Hardy-Weinberg principle is a widely used principle to determine allelic and genotype frequencies.

Hardy-Weinberg principle

The Hardy-Weinberg principle states that when no evolution occurs in a population the allele and genotype frequencies do not change from one generation to the next. No evolution refers to no mutation, no gene flow, no natural selection, and no genetic drift. To be in equilibrium two more assumptions need to be made that random mating occurs and there are discrete, non-overlapping generations.

Mitochondrial DNA

In addition to nuclear DNA, humans (like almost all eukaryotes) have mitochondrial DNA. Mitochondria, the "power houses" of a cell, have their own DNA because they are descended from a proteobacterium that merged with eukaryotic cells over 2 billion years ago—an assertion known as the endosymbiotic hypothesis. Mitochondria are inherited from one's mother, and its DNA is frequently used to trace maternal lines of descent (see mitochondrial Eve). Mitochondrial DNA is only 16kb in length and encodes for 62 genes.

Genes and human characteristics

Genes are a fundamental unit of inheritance. Genes can be defined as a sequence of DNA in the genome that is required for production of a functional product. Genes have both minor and major effects on human characteristics. Human genes have become prominent in the nature versus nurture debate.

Genes and behavior

Genes have a strong influence on human behavior. IQ is largely heritable. However, this has been questioned. The stance that humans inherit substantial behavioral characteristics is called psychological nativism, compared to the stance that human behavior and culture are virtually entirely constructed (tabula rasa).

In the early 20th century, eugenics was policy in parts of the United States and Europe. The goal was to reduce or eliminate traits that were considered undesirable. One form of eugenics was compulsory sterilization of people deemed mentally unfit. Hitler's eugenics programs turned social consciousness against the practice, and psychological nativism became associated with racism and sexism.

Genes and gender

Main article: Genetics of gender

The biggest genes and culture affect gender roles. The case of David Reimer was once a case in point for the tabula rasa camp, though recently that same case has become evidence for a strong genetic component to gender identity.

Evolutionary psychology

Evolutionary psychology explains many human behaviors as more or less moderated by genes that evolved in the hunter-gatherer stage of human cultural development. See for example Stockholm syndrome.

Genetic disorders

Main article: Genetic disorder

Humans have several genetic diseases, often blamed on rare recessive genes. A few examples of human genetic diseases are: Turner Syndrome, Huntington's disease, Downs Syndrome (in some cases), and sickle cell anemia. For a more comprehensive list see List of genetic disorders. Genetic disorders happen everywhere and are very common in some places.

• Cri du Chat syndrome – A disorder caused from a deletion on the short arm of chromosome 5. This deletion results in a phenotype of mental retardation, behavioral problems, and a cat like call. About one in every 50,000 births will have the syndrome.
• Huntington's disease – A neurological disorder caused by a trinucleotide repeat sequence. Huntingtons is an autosomal dominant trait. Most individuals with the disease will first display the phenotype around 40 years of age. The symptoms are jerky uncontrollable movements, mental retardation, and behavioral problems.
• Turner syndrome – A condition that effects females caused by a 45, XO genotype instead of the normal XX genotype. These individuals have only one X chromosome. These individuals are phenotypically female, but will be sterile due to undeveloped ovaries.
• Klinefelter syndrome – A disorder in males caused by the presence of an extra X chromosome. These individuals have a genotype of 47, XXY instead of the normal XY genotype. The symptoms for this syndrome are enlarged breasts, small testes, and sterility.

Human traits with simple inheritance patterns

Main article: List of Mendelian traits in humans

Dominant	Recessive	References
Widow's peak	No Widow's peak
Facial Dimples	No Facial Dimples
Able to taste PTC	Unable to taste PTC
Unattached earlobe	Attached earlobe
Cleft chin	No Cleft chin
Brunette iris (anatomy)	Blue Iris (anatomy)
Color Vision	Color blindness
Brunette Hair	Blonde Hair
normal	turned up nose
Ability to roll tongue (Able to hold tongue in a U shape)	No ability to roll tongue
Normal Pinkies	Crooked Pinkies
Normal Thumb	Hitchhiker's Thumb
Freckles	No Freckles
Wet-type earwax	Dry-type earwax

See also

• Human evolutionary genetics
• Human genome
• Genetic genealogy
• Human genetic clustering
• Genealogical DNA test
• List of Mendelian traits in humans
• Primatology
• HAX1

• Y-DNA haplogroups by ethnic groups
• List of haplogroups of historical and famous figures
• Genetic history of indigenous peoples of the Americas
• Genetic history of the British Isles
• Archaeogenetics of the Near East
• Genetics and archaeogenetics of South Asia
• Genetic history of Europe
• Genetic history of Italy
• Race and genetics

External links

• Human Genome Project
• How many Genes do humans have?
• Human Genetics Video (website critique)