JME Molecule Editor: Difference between revisions
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The '''JME Molecular Editor''' is a [[molecule editor]] [[Java (software platform)|Java]] [[applet]] with which users make and edit drawings of [[molecules]] and reactions (including generating substructure queries), and can display molecules within an [[HTML]] page.<ref name="Description">{{cite journal|last1=Ertl|first1=Peter|title=Molecular structure input on the web|journal=Journal of Cheminformatics|date=2010|volume=2|issue=1|pages=1|doi=10.1186/1758-2946-2-1}}</ref> The editor can generate Daylight [[simplified molecular-input line-entry system]] (SMILES) or [[Chemical table file|MDL Molfiles]] of the created structures. |
The '''JME Molecular Editor''' is a [[molecule editor]] [[Java (software platform)|Java]] [[applet]] with which users make and edit drawings of [[molecules]] and reactions (including generating substructure queries), and can display molecules within an [[HTML]] page.<ref name="Description">{{cite journal|last1=Ertl|first1=Peter|title=Molecular structure input on the web|journal=Journal of Cheminformatics|date=2010|volume=2|issue=1|pages=1|doi=10.1186/1758-2946-2-1|pmid=20298528|pmc=2827360}}</ref> The editor can generate Daylight [[simplified molecular-input line-entry system]] (SMILES) or [[Chemical table file|MDL Molfiles]] of the created structures. |
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The JME Editor was written by Peter Ertl while at [[Comenius University]] in Bratislava, and then at Ciba-Geigy, later merged with Sandoz Laboratories, to form [[Novartis]] International AG, in [[Basel]], Switzerland. |
The JME Editor was written by Peter Ertl while at [[Comenius University]] in Bratislava, and then at Ciba-Geigy, later merged with Sandoz Laboratories, to form [[Novartis]] International AG, in [[Basel]], Switzerland. |
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*[[Cheminformatics]] |
*[[Cheminformatics]] |
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*[[Comparison of software for molecular mechanics modeling]] |
*[[Comparison of software for molecular mechanics modeling]] |
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==External links== |
==External links== |
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* {{Official website|www.molinspiration.com/jme}}, JME |
* {{Official website|www.molinspiration.com/jme}}, JME |
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* {{Official website|peter-ertl.com/jsme}}, JSME |
* {{Official website|peter-ertl.com/jsme}}, JSME |
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==Notes== |
==Notes== |
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[[Category:Computational chemistry software]] |
[[Category:Computational chemistry software]] |
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[[Category:Cheminformatics]] |
[[Category:Cheminformatics]] |
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{{chem-stub}} |
{{chem-stub}} |
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Revision as of 09:45, 27 December 2016
 Molecule displayed with JME Molecular Editor | |
| Original author(s) | Peter Ertl |
|---|---|
| Developer(s) | Comenius University in Bratislava; Ciba-Geigy, Novartis; Basel |
| Initial release | 2010 |
| Stable release | 2012.05
/ May 2012 |
| Written in | Java |
| Operating system | Cross-platform |
| Platform | Java |
| Available in | English |
| Type | Molecule editor |
| License | Proprietary freeware |
| Website | www |
The JME Molecular Editor is a molecule editor Java applet with which users make and edit drawings of molecules and reactions (including generating substructure queries), and can display molecules within an HTML page.[1] The editor can generate Daylight simplified molecular-input line-entry system (SMILES) or MDL Molfiles of the created structures.
The JME Editor was written by Peter Ertl while at Comenius University in Bratislava, and then at Ciba-Geigy, later merged with Sandoz Laboratories, to form Novartis International AG, in Basel, Switzerland.
It is released as freeware for non-commercial use and has become a standard for molecular-structure input on the web.[1][2]
JSME
| Original author(s) | Peter Ertl, Bruno Bienfait |
|---|---|
| Developer(s) | Novartis Institutes for Biomedical Research; Basel |
| Initial release | 2013 |
| Stable release | 2016-07-31
/ 31 July 2016 |
| Written in | JavaScript |
| Operating system | Cross-platform |
| Platform | Web browser |
| Available in | English |
| Type | Molecule editor |
| License | Open-source BSD |
| Website | peter-ertl |
JME has been ported to JavaScript using the Google Web Toolkit (GWT). In analogy to JME, the JavaScript version is named JSME.[2] It is released as free and open-source software under a BSD license.
See also
References
- ^ Ertl, Peter (2010). "Molecular structure input on the web". Journal of Cheminformatics. 2 (1): 1. doi:10.1186/1758-2946-2-1. PMC 2827360. PMID 20298528.
{{cite journal}}: CS1 maint: unflagged free DOI (link) - ^ Bienfait, Bruno; Ertl, Peter (2013). "JSME: a free molecule editor in JavaScript". Journal of Cheminformatics. 5 (1): 24. doi:10.1186/1758-2946-5-24.
{{cite journal}}: CS1 maint: unflagged free DOI (link)
External links
- Official website, JME
- Official website, JSME
Notes
- ^ Interesting cheminformatics services using the JME editor
- ^ List of institutions using the JME applet
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