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'''Rita Casadio''' is a [[Professor]] of [[Biochemistry]] at the [[University of Bologna]].<ref name=gs>{{Google scholar id}}</ref><ref name=dblp>{{DBLP}}</ref><ref name=epmc>{{EuropePMC}}</ref><ref name=scopus>{{Scopus id}}</ref><ref name=griffin>{{cite journal|last1=Griffin|first1=Martin|last2=Casadio|first2=Rita|last3=Bergamini|first3=Carlo M.|title=Transglutaminases: Nature’s biological glues|journal=Biochemical Journal|volume=368|issue=2|year=2002|pages=377–396|issn=0264-6021|doi=10.1042/bj20021234|pmid=12366374 |pmc=1223021}}</ref><ref name="CapriottiFariselli2005">{{cite journal|last1=Capriotti|first1=E.|last2=Fariselli|first2=P.|last3=Casadio|first3=R.|title=I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure|journal=Nucleic Acids Research|volume=33|issue=Web Server|year=2005|pages=W306–W310|issn=0305-1048|doi=10.1093/nar/gki375|pmid= 15980478 |pmc=1160136}}</ref> She was elected a [[Fellow]] of the [[International Society for Computational Biology]] (ISCB) in 2020 for outstanding contributions to the fields of [[computational biology]] and [[bioinformatics]].<ref name=iscb>{{cite web|url=https://www.iscb.org/iscb-news-items/4250-2020-feb19-iscb-congratulates-2020-class-fellows|title=ISCB Congratulates and Introduces the 2020 Class of Fellows!|website=iscb.org|author=Anon|year=2020|publisher=International Society for Computational Biology}}</ref> Her work in [[machine learning]] has been used for [[protein structure prediction]] and methods from her group have been highly ranked in international competitions such as the [[CASP|Critical Assessment of protein Structure Prediction]] (CASP), and the [[Critical Assessment of Function Annotation]] (CAFA).<ref>{{Cite web|url=https://www.iscb.org/iscb-fellows|title=ISCB Fellows|website=iscb.org|publisher=International Society for Computational Biology|author=Anon|year=2020}}</ref><ref name="RadivojacClark2013">{{cite journal|last1=Radivojac|first1=Predrag|last2=Clark|first2=Wyatt T|last3=Oron|first3=Tal Ronnen|last4=Schnoes|first4=Alexandra M|last5=Wittkop|first5=Tobias|last6=Sokolov|first6=Artem|last7=Graim|first7=Kiley|last8=Funk|first8=Christopher|last9=Verspoor|first9=Karin|last10=Ben-Hur|first10=Asa|last11=Pandey|first11=Gaurav|last12=Yunes|first12=Jeffrey M|last13=Talwalkar|first13=Ameet S|last14=Repo|first14=Susanna|last15=Souza|first15=Michael L|last16=Piovesan|first16=Damiano|last17=Casadio|first17=Rita|last18=Wang|first18=Zheng|last19=Cheng|first19=Jianlin|last20=Fang|first20=Hai|last21=Gough|first21=Julian|last22=Koskinen|first22=Patrik|last23=Törönen|first23=Petri|last24=Nokso-Koivisto|first24=Jussi|last25=Holm|first25=Liisa|last26=Cozzetto|first26=Domenico|last27=Buchan|first27=Daniel W A|last28=Bryson|first28=Kevin|last29=Jones|first29=David T|last30=Limaye|first30=Bhakti|last31=Inamdar|first31=Harshal|last32=Datta|first32=Avik|last33=Manjari|first33=Sunitha K|last34=Joshi|first34=Rajendra|last35=Chitale|first35=Meghana|last36=Kihara|first36=Daisuke|last37=Lisewski|first37=Andreas M|last38=Erdin|first38=Serkan|last39=Venner|first39=Eric|last40=Lichtarge|first40=Olivier|last41=Rentzsch|first41=Robert|last42=Yang|first42=Haixuan|last43=Romero|first43=Alfonso E|last44=Bhat|first44=Prajwal|last45=Paccanaro|first45=Alberto|last46=Hamp|first46=Tobias|last47=Kaßner|first47=Rebecca|last48=Seemayer|first48=Stefan|last49=Vicedo|first49=Esmeralda|last50=Schaefer|first50=Christian|last51=Achten|first51=Dominik|last52=Auer|first52=Florian|last53=Boehm|first53=Ariane|last54=Braun|first54=Tatjana|last55=Hecht|first55=Maximilian|last56=Heron|first56=Mark|last57=Hönigschmid|first57=Peter|last58=Hopf|first58=Thomas A|last59=Kaufmann|first59=Stefanie|last60=Kiening|first60=Michael|last61=Krompass|first61=Denis|last62=Landerer|first62=Cedric|last63=Mahlich|first63=Yannick|last64=Roos|first64=Manfred|last65=Björne|first65=Jari|last66=Salakoski|first66=Tapio|last67=Wong|first67=Andrew|last68=Shatkay|first68=Hagit|last69=Gatzmann|first69=Fanny|last70=Sommer|first70=Ingolf|last71=Wass|first71=Mark N|last72=Sternberg|first72=Michael J E|last73=Škunca|first73=Nives|last74=Supek|first74=Fran|last75=Bošnjak|first75=Matko|last76=Panov|first76=Panče|last77=Džeroski|first77=Sašo|last78=Šmuc|first78=Tomislav|last79=Kourmpetis|first79=Yiannis A I|last80=van Dijk|first80=Aalt D J |last81=Braak|first81=Cajo J F ter|last82=Zhou|first82=Yuanpeng|last83=Gong|first83=Qingtian|last84=Dong|first84=Xinran|last85=Tian|first85=Weidong|last86=Falda|first86=Marco|last87=Fontana|first87=Paolo|last88=Lavezzo|first88=Enrico|last89=Di Camillo|first89=Barbara|last90=Toppo|first90=Stefano|last91=Lan|first91=Liang|last92=Djuric|first92=Nemanja|last93=Guo|first93=Yuhong|last94=Vucetic|first94=Slobodan|last95=Bairoch|first95=Amos|last96=Linial|first96=Michal|last97=Babbitt|first97=Patricia C|last98=Brenner|first98=Steven E|last99=Orengo|first99=Christine|last100=Rost|first100=Burkhard|last101=Mooney|first101=Sean D|last102=Friedberg|first102=Iddo|title=A large-scale evaluation of computational protein function prediction|journal=Nature Methods|volume=10|issue=3|year=2013|pages=221–227|issn=1548-7091|doi=10.1038/nmeth.2340|display-authors=7|pmid=23353650 |pmc=3584181}}</ref><ref name="RostSander2008">{{cite journal|last1=Rost|first1=Burkhard|last2=Sander|first2=Chris|last3=Casadio|first3=Rita|last4=Fariselli|first4=Piero|title=Transmembrane helices predicted at 95% accuracy|journal=Protein Science|volume=4|issue=3|year=2008|pages=521–533|issn=0961-8368|doi=10.1002/pro.5560040318|pmid=7795533 |pmc=2143072}}</ref><ref name="RostFariselli1996">{{cite journal|last1=Rost|first1=Burkhard|last2=Fariselli|first2=Piero|last3=Casadio|first3=Rita|title=Topology prediction for helical transmembrane proteins at 86% accuracy-Topology prediction at 86% accuracy|journal=Protein Science|volume=5|issue=8|year=1996|pages=1704–1718|issn=0961-8368|doi=10.1002/pro.5560050824|pmid=8844859 |pmc=2143485}}</ref>
'''Rita Casadio''' is a [[Professor]] of [[Biochemistry]] at the [[University of Bologna]].<ref name=gs>{{Google scholar id}}</ref><ref name=dblp>{{DBLP}}</ref><ref name=epmc>{{EuropePMC}}</ref><ref name=scopus>{{Scopus id}}</ref><ref name=griffin>{{cite journal|last1=Griffin|first1=Martin|last2=Casadio|first2=Rita|last3=Bergamini|first3=Carlo M.|title=Transglutaminases: Nature’s biological glues|journal=Biochemical Journal|volume=368|issue=2|year=2002|pages=377–396|issn=0264-6021|doi=10.1042/bj20021234|pmid=12366374 |pmc=1223021}}</ref><ref name="CapriottiFariselli2005">{{cite journal|last1=Capriotti|first1=E.|last2=Fariselli|first2=P.|last3=Casadio|first3=R.|title=I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure|journal=Nucleic Acids Research|volume=33|issue=Web Server|year=2005|pages=W306–W310|issn=0305-1048|doi=10.1093/nar/gki375|pmid= 15980478 |pmc=1160136}}</ref> She was elected a [[Fellow]] of the [[International Society for Computational Biology]] (ISCB) in 2020 for outstanding contributions to the fields of [[computational biology]] and [[bioinformatics]].<ref name=iscb>{{cite web|url=https://www.iscb.org/iscb-news-items/4250-2020-feb19-iscb-congratulates-2020-class-fellows|title=ISCB Congratulates and Introduces the 2020 Class of Fellows!|website=iscb.org|author=Anon|year=2020|publisher=International Society for Computational Biology}}</ref> Her work in [[machine learning]] has been used for [[protein structure prediction]] and methods from her group have been highly ranked in international competitions such as the [[CASP|Critical Assessment of protein Structure Prediction]] (CASP), and the [[Critical Assessment of Function Annotation]] (CAFA).<ref>{{Cite web|url=https://www.iscb.org/iscb-fellows|title=ISCB Fellows|website=iscb.org|publisher=International Society for Computational Biology|author=Anon|year=2020}}</ref><ref name="RadivojacClark2013">{{cite journal|last1=Radivojac|first1=Predrag|last2=Clark|first2=Wyatt T|last3=Oron|first3=Tal Ronnen|last4=Schnoes|first4=Alexandra M|last5=Wittkop|first5=Tobias|last6=Sokolov|first6=Artem|last7=Graim|first7=Kiley|last8=Funk|first8=Christopher|last9=Verspoor|first9=Karin|last10=Ben-Hur|first10=Asa|last11=Pandey|first11=Gaurav|last12=Yunes|first12=Jeffrey M|last13=Talwalkar|first13=Ameet S|last14=Repo|first14=Susanna|last15=Souza|first15=Michael L|last16=Piovesan|first16=Damiano|last17=Casadio|first17=Rita|last18=Wang|first18=Zheng|last19=Cheng|first19=Jianlin|last20=Fang|first20=Hai|last21=Gough|first21=Julian|last22=Koskinen|first22=Patrik|last23=Törönen|first23=Petri|last24=Nokso-Koivisto|first24=Jussi|last25=Holm|first25=Liisa|last26=Cozzetto|first26=Domenico|last27=Buchan|first27=Daniel W A|last28=Bryson|first28=Kevin|last29=Jones|first29=David T|last30=Limaye|first30=Bhakti|last31=Inamdar|first31=Harshal|last32=Datta|first32=Avik|last33=Manjari|first33=Sunitha K|last34=Joshi|first34=Rajendra|last35=Chitale|first35=Meghana|last36=Kihara|first36=Daisuke|last37=Lisewski|first37=Andreas M|last38=Erdin|first38=Serkan|last39=Venner|first39=Eric|last40=Lichtarge|first40=Olivier|last41=Rentzsch|first41=Robert|last42=Yang|first42=Haixuan|last43=Romero|first43=Alfonso E|last44=Bhat|first44=Prajwal|last45=Paccanaro|first45=Alberto|last46=Hamp|first46=Tobias|last47=Kaßner|first47=Rebecca|last48=Seemayer|first48=Stefan|last49=Vicedo|first49=Esmeralda|last50=Schaefer|first50=Christian|last51=Achten|first51=Dominik|last52=Auer|first52=Florian|last53=Boehm|first53=Ariane|last54=Braun|first54=Tatjana|last55=Hecht|first55=Maximilian|last56=Heron|first56=Mark|last57=Hönigschmid|first57=Peter|last58=Hopf|first58=Thomas A|last59=Kaufmann|first59=Stefanie|last60=Kiening|first60=Michael|last61=Krompass|first61=Denis|last62=Landerer|first62=Cedric|last63=Mahlich|first63=Yannick|last64=Roos|first64=Manfred|last65=Björne|first65=Jari|last66=Salakoski|first66=Tapio|last67=Wong|first67=Andrew|last68=Shatkay|first68=Hagit|last69=Gatzmann|first69=Fanny|last70=Sommer|first70=Ingolf|last71=Wass|first71=Mark N|last72=Sternberg|first72=Michael J E|last73=Škunca|first73=Nives|last74=Supek|first74=Fran|last75=Bošnjak|first75=Matko|last76=Panov|first76=Panče|last77=Džeroski|first77=Sašo|last78=Šmuc|first78=Tomislav|last79=Kourmpetis|first79=Yiannis A I|last80=van Dijk|first80=Aalt D J |last81=Braak|first81=Cajo J F ter|last82=Zhou|first82=Yuanpeng|last83=Gong|first83=Qingtian|last84=Dong|first84=Xinran|last85=Tian|first85=Weidong|last86=Falda|first86=Marco|last87=Fontana|first87=Paolo|last88=Lavezzo|first88=Enrico|last89=Di Camillo|first89=Barbara|last90=Toppo|first90=Stefano|last91=Lan|first91=Liang|last92=Djuric|first92=Nemanja|last93=Guo|first93=Yuhong|last94=Vucetic|first94=Slobodan|last95=Bairoch|first95=Amos|last96=Linial|first96=Michal|last97=Babbitt|first97=Patricia C|last98=Brenner|first98=Steven E|last99=Orengo|first99=Christine|last100=Rost|first100=Burkhard|last101=Mooney|first101=Sean D|last102=Friedberg|first102=Iddo|title=A large-scale evaluation of computational protein function prediction|journal=Nature Methods|volume=10|issue=3|year=2013|pages=221–227|issn=1548-7091|doi=10.1038/nmeth.2340|display-authors=7|pmid=23353650 |pmc=3584181}}</ref><ref name="RostSander2008">{{cite journal|last1=Rost|first1=Burkhard|last2=Sander|first2=Chris|last3=Casadio|first3=Rita|last4=Fariselli|first4=Piero|title=Transmembrane helices predicted at 95% accuracy|journal=Protein Science|volume=4|issue=3|year=2008|pages=521–533|issn=0961-8368|doi=10.1002/pro.5560040318|pmid=7795533 |pmc=2143072}}</ref><ref name="RostFariselli1996">{{cite journal|last1=Rost|first1=Burkhard|last2=Fariselli|first2=Piero|last3=Casadio|first3=Rita|title=Topology prediction for helical transmembrane proteins at 86% accuracy-Topology prediction at 86% accuracy|journal=Protein Science|volume=5|issue=8|year=1996|pages=1704–1718|issn=0961-8368|doi=10.1002/pro.5560050824|pmid=8844859 |pmc=2143485}}</ref>
{{clear}}

==See also==
*[[ELIXIR]]


==References==
==References==
{{reflist}}
{{reflist}}

==External links==
{{scholia}}
*{{Google scholar id}}
*{{ResearchGate|Rita_Casadio}}


{{ISCB Fellows}}
{{ISCB Fellows}}

{{Authority control}}
{{Authority control}}

{{DEFAULTSORT:Casadio, Rita}}
{{DEFAULTSORT:Casadio, Rita}}
[[Category:Living people]]
[[Category:Living people]]
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[[Category:University of Bologna faculty]]
[[Category:University of Bologna faculty]]
[[Category:Year of birth missing (living people)]]
[[Category:Year of birth missing (living people)]]


{{Scientist-stub}}
{{Scientist-stub}}

Revision as of 00:22, 3 December 2020

Rita Casadio
Alma materUniversity of Bologna (PhD)
AwardsISCB Fellow (2020)[1]
Scientific career
FieldsMachine learning
SNP annotation
Bioinformatics
Computational biology
Genome annoation[2]
InstitutionsUniversity of Bologna
Websitewww.biocomp.unibo.it/casadio/ Edit this at Wikidata

Rita Casadio is a Professor of Biochemistry at the University of Bologna.[2][3][4][5][6][7] She was elected a Fellow of the International Society for Computational Biology (ISCB) in 2020 for outstanding contributions to the fields of computational biology and bioinformatics.[1] Her work in machine learning has been used for protein structure prediction and methods from her group have been highly ranked in international competitions such as the Critical Assessment of protein Structure Prediction (CASP), and the Critical Assessment of Function Annotation (CAFA).[8][9][10][11]

See also

References

  1. ^ a b Anon (2020). "ISCB Congratulates and Introduces the 2020 Class of Fellows!". iscb.org. International Society for Computational Biology.
  2. ^ a b Rita Casadio publications indexed by Google Scholar Edit this at Wikidata
  3. ^ Rita Casadio at DBLP Bibliography Server Edit this at Wikidata
  4. ^ Rita Casadio publications from Europe PubMed Central
  5. ^ Rita Casadio publications indexed by the Scopus bibliographic database. (subscription required)
  6. ^ Griffin, Martin; Casadio, Rita; Bergamini, Carlo M. (2002). "Transglutaminases: Nature's biological glues". Biochemical Journal. 368 (2): 377–396. doi:10.1042/bj20021234. ISSN 0264-6021. PMC 1223021. PMID 12366374.
  7. ^ Capriotti, E.; Fariselli, P.; Casadio, R. (2005). "I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure". Nucleic Acids Research. 33 (Web Server): W306–W310. doi:10.1093/nar/gki375. ISSN 0305-1048. PMC 1160136. PMID 15980478.
  8. ^ Anon (2020). "ISCB Fellows". iscb.org. International Society for Computational Biology.
  9. ^ Radivojac, Predrag; Clark, Wyatt T; Oron, Tal Ronnen; Schnoes, Alexandra M; Wittkop, Tobias; Sokolov, Artem; Graim, Kiley; et al. (2013). "A large-scale evaluation of computational protein function prediction". Nature Methods. 10 (3): 221–227. doi:10.1038/nmeth.2340. ISSN 1548-7091. PMC 3584181. PMID 23353650.
  10. ^ Rost, Burkhard; Sander, Chris; Casadio, Rita; Fariselli, Piero (2008). "Transmembrane helices predicted at 95% accuracy". Protein Science. 4 (3): 521–533. doi:10.1002/pro.5560040318. ISSN 0961-8368. PMC 2143072. PMID 7795533.
  11. ^ Rost, Burkhard; Fariselli, Piero; Casadio, Rita (1996). "Topology prediction for helical transmembrane proteins at 86% accuracy-Topology prediction at 86% accuracy". Protein Science. 5 (8): 1704–1718. doi:10.1002/pro.5560050824. ISSN 0961-8368. PMC 2143485. PMID 8844859.
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