Cav2.1

CACNA1A
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 3BXK
Identifiers
Aliases	CACNA1A, APCA, BI, CACNL1A4, CAV2.1, EA2, FHM, HPCA, MHP, MHP1, SCA6, Cav2.1, calcium voltage-gated channel subunit alpha1 A, EIEE42, DEE42
External IDs	OMIM: 601011; MGI: 109482; HomoloGene: 56383; GeneCards: CACNA1A; OMA:CACNA1A - orthologs
Gene location (Human) Chr. Chromosome 19 (human) Band 19p13.13 Start 13,206,442 bp End 13,633,025 bp
Gene location (Mouse) Chr. Chromosome 8 (mouse) Band 8 C2- C3|8 40.95 cM Start 85,065,268 bp End 85,366,875 bp
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in cerebellar hemisphere right hemisphere of cerebellum Brodmann area 23 postcentral gyrus Pons primary visual cortex superior frontal gyrus endothelial cell middle temporal gyrus buccal mucosa cell Top expressed in cerebellar cortex superior frontal gyrus lobe of cerebellum cerebellar vermis primary visual cortex dentate gyrus of hippocampal formation granule cell Rostral migratory stream inferior colliculi primary motor cortex neural layer of retina More reference expression data BioGPS More reference expression data
Gene ontology Molecular function metal ion binding ion channel activity voltage-gated ion channel activity syntaxin binding protein binding voltage-gated calcium channel activity calcium channel activity high voltage-gated calcium channel activity amyloid-beta binding Cellular component cytoplasm voltage-gated calcium channel complex cell projection nucleus membrane integral component of membrane plasma membrane soma Biological process calcium ion transport cell death transmembrane transport membrane depolarization during action potential regulation of ion transmembrane transport ion transport transport regulation of insulin secretion calcium ion transmembrane transport positive regulation of cytosolic calcium ion concentration membrane depolarization chemical synaptic transmission modulation of chemical synaptic transmission calcium ion import response to amyloid-beta cellular response to amyloid-beta Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 773 12286 Ensembl ENSG00000141837 ENSMUSG00000034656 UniProt O00555 P97445 RefSeq (mRNA) NM_023035 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_001252059 NM_001252060 NM_001252061 NM_007578 RefSeq (protein) NP_000059 NP_001120693 NP_001120694 NP_001167551 NP_075461 NP_001238988 NP_001238989 NP_001238990 NP_031604 Location (UCSC) Chr 19: 13.21 – 13.63 Mb Chr 8: 85.07 – 85.37 Mb PubMed search
Wikidata
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The Ca_v2.1 P/Q voltage-dependent calcium channel is encoded by the CACNA1A gene.

Function

Voltage-dependent calcium channels mediate the entry of calcium ions into excitable cells, and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, and gene expression. Calcium channels are multisubunit complexes composed of alpha-1, beta, alpha-2/delta, and gamma subunits. The channel activity is directed by the pore-forming alpha-1 subunit, whereas, the others act as auxiliary subunits regulating this activity. The distinctive properties of the calcium channel types are related primarily to the expression of a variety of alpha-1 isoforms, alpha-1A, B, C, D, E, and S. This gene encodes the alpha-1A subunit, which is predominantly expressed in neuronal tissue.

Clinical significance

Mutations in this gene are associated with multiple neurologic disorders, many of which are episodic, such as familial hemiplegic migraine, movement disorders such as episodic ataxia, and epilepsy with multiple seizure types.

This gene also exhibits polymorphic variation due to (CAG)n-repeats. Multiple transcript variants have been described, however, the full-length nature of not all is known. In one set of transcript variants, the (CAG)n-repeats occur in the 3' UTR, and are not associated with any disease. However, in another set of variants, an insertion extends the coding region to include the (CAG)n-repeats which encode a polyglutamine tract. Expansion of the (CAG)n-repeats from the normal 4-16 to 21-28 in the coding region is associated with spinocerebellar ataxia 6.

Interactions

Cav2.1 has been shown to interact with CACNB4.

Further reading

• Terwindt G, Kors E, Haan J, Vermeulen F, Van den Maagdenberg A, Frants R, Ferrari M (2002). "Mutation analysis of the CACNA1A calcium channel subunit gene in 27 patients with sporadic hemiplegic migraine". Arch. Neurol. 59 (6): 1016–8. doi:10.1001/archneur.59.6.1016. PMID 12056940.
• Catterall WA, Perez-Reyes E, Snutch TP, Striessnig J (2005). "International Union of Pharmacology. XLVIII. Nomenclature and structure-function relationships of voltage-gated calcium channels". Pharmacol. Rev. 57 (4): 411–25. doi:10.1124/pr.57.4.5. PMID 16382099.
• Perez-Reyes E, Castellano A, Kim HS, Bertrand P, Baggstrom E, Lacerda AE, Wei XY, Birnbaumer L (1992). "Cloning and expression of a cardiac/brain beta subunit of the L-type calcium channel". J. Biol. Chem. 267 (3): 1792–7. PMID 1370480.
• Barry EL, Viglione MP, Kim YI, Froehner SC (1995). "Expression and antibody inhibition of P-type calcium channels in human small-cell lung carcinoma cells". J. Neurosci. 15 (1 Pt 1): 274–83. doi:10.1523/JNEUROSCI.15-01-00274.1995. PMID 7823133.
• Joutel A, Bousser MG, Biousse V, Labauge P, Chabriat H, Nibbio A, Maciazek J, Meyer B, Bach MA, Weissenbach J (1993). "A gene for familial hemiplegic migraine maps to chromosome 19". Nat. Genet. 5 (1): 40–5. doi:10.1038/ng0993-40. PMID 8220421.
• Margolis RL, Breschel TS, Li SH, Kidwai AS, Antonarakis SE, McInnis MG, Ross CA (1995). "Characterization of cDNA clones containing CCA trinucleotide repeats derived from human brain". Somat. Cell Mol. Genet. 21 (4): 279–84. doi:10.1007/BF02255782. PMID 8525433.
• Rettig J, Sheng ZH, Kim DK, Hodson CD, Snutch TP, Catterall WA (1996). "Isoform-specific interaction of the alpha1A subunits of brain Ca2+ channels with the presynaptic proteins syntaxin and SNAP-25". Proc. Natl. Acad. Sci. U.S.A. 93 (14): 7363–8. doi:10.1073/pnas.93.14.7363. PMC 38990. PMID 8692999.
• Diriong S, Lory P, Williams ME, Ellis SB, Harpold MM, Taviaux S (1995). "Chromosomal localization of the human genes for alpha 1A, alpha 1B, and alpha 1E voltage-dependent Ca2+ channel subunits". Genomics. 30 (3): 605–9. doi:10.1006/geno.1995.1284. PMID 8825650.
• Ophoff RA, Terwindt GM, Vergouwe MN, van Eijk R, Oefner PJ, Hoffman SM, Lamerdin JE, Mohrenweiser HW, Bulman DE, Ferrari M, Haan J, Lindhout D, van Ommen GJ, Hofker MH, Ferrari MD, Frants RR (1996). "Familial hemiplegic migraine and episodic ataxia type-2 are caused by mutations in the Ca2+ channel gene CACNL1A4". Cell. 87 (3): 543–52. doi:10.1016/S0092-8674(00)81373-2. PMID 8898206.
• Zhuchenko O, Bailey J, Bonnen P, Ashizawa T, Stockton DW, Amos C, Dobyns WB, Subramony SH, Zoghbi HY, Lee CC (1997). "Autosomal dominant cerebellar ataxia (SCA6) associated with small polyglutamine expansions in the alpha 1A-voltage-dependent calcium channel". Nat. Genet. 15 (1): 62–9. doi:10.1038/ng0197-62. PMID 8988170.
• De Waard M, Liu H, Walker D, Scott VE, Gurnett CA, Campbell KP (1997). "Direct binding of G-protein betagamma complex to voltage-dependent calcium channels". Nature. 385 (6615): 446–50. doi:10.1038/385446a0. PMID 9009193.
• Qin N, Platano D, Olcese R, Stefani E, Birnbaumer L (1997). "Direct interaction of gbetagamma with a C-terminal gbetagamma-binding domain of the Ca2+ channel alpha1 subunit is responsible for channel inhibition by G protein-coupled receptors". Proc. Natl. Acad. Sci. U.S.A. 94 (16): 8866–71. doi:10.1073/pnas.94.16.8866. PMC 23172. PMID 9238069.
• Riess O, Schöls L, Bottger H, Nolte D, Vieira-Saecker AM, Schimming C, Kreuz F, Macek M, Krebsová A, Klockgether T, Zühlke C, Laccone FA (1997). "SCA6 is caused by moderate CAG expansion in the alpha1A-voltage-dependent calcium channel gene". Hum. Mol. Genet. 6 (8): 1289–93. doi:10.1093/hmg/6.8.1289. PMID 9259275.
• Jodice C, Mantuano E, Veneziano L, Trettel F, Sabbadini G, Calandriello L, Francia A, Spadaro M, Pierelli F, Salvi F, Ophoff RA, Frants RR, Frontali M (1997). "Episodic ataxia type 2 (EA2) and spinocerebellar ataxia type 6 (SCA6) due to CAG repeat expansion in the CACNA1A gene on chromosome 19p". Hum. Mol. Genet. 6 (11): 1973–8. doi:10.1093/hmg/6.11.1973. PMID 9302278.
• Charvin N, L'evêque C, Walker D, Berton F, Raymond C, Kataoka M, Shoji-Kasai Y, Takahashi M, De Waard M, Seagar MJ (1997). "Direct interaction of the calcium sensor protein synaptotagmin I with a cytoplasmic domain of the alpha1A subunit of the P/Q-type calcium channel". EMBO J. 16 (15): 4591–6. doi:10.1093/emboj/16.15.4591. PMC 1170085. PMID 9303303.
• Ishikawa K, Tanaka H, Saito M, Ohkoshi N, Fujita T, Yoshizawa K, Ikeuchi T, Watanabe M, Hayashi A, Takiyama Y, Nishizawa M, Nakano I, Matsubayashi K, Miwa M, Shoji S, Kanazawa I, Tsuji S, Mizusawa H (1997). "Japanese families with autosomal dominant pure cerebellar ataxia map to chromosome 19p13.1-p13.2 and are strongly associated with mild CAG expansions in the spinocerebellar ataxia type 6 gene in chromosome 19p13.1". Am. J. Hum. Genet. 61 (2): 336–46. doi:10.1086/514867. PMC 1715894. PMID 9311738.
• Walker D, Bichet D, Campbell KP, De Waard M (1998). "A beta 4 isoform-specific interaction site in the carboxyl-terminal region of the voltage-dependent Ca2+ channel alpha 1A subunit". J. Biol. Chem. 273 (4): 2361–7. doi:10.1074/jbc.273.4.2361. PMID 9442082.{{cite journal}}: CS1 maint: unflagged free DOI (link)
• Yue Q, Jen JC, Thwe MM, Nelson SF, Baloh RW (1998). "De novo mutation in CACNA1A caused acetazolamide-responsive episodic ataxia". Am. J. Med. Genet. 77 (4): 298–301. doi:10.1002/(SICI)1096-8628(19980526)77:4<298::AID-AJMG9>3.0.CO;2-J. PMID 9600739.
• Hans M, Urrutia A, Deal C, Brust PF, Stauderman K, Ellis SB, Harpold MM, Johnson EC, Williams ME (1999). "Structural elements in domain IV that influence biophysical and pharmacological properties of human alpha1A-containing high-voltage-activated calcium channels". Biophys. J. 76 (3): 1384–400. doi:10.1016/S0006-3495(99)77300-5. PMC 1300117. PMID 10049321.
• Walker D, Bichet D, Geib S, Mori E, Cornet V, Snutch TP, Mori Y, De Waard M (1999). "A new beta subtype-specific interaction in alpha1A subunit controls P/Q-type Ca2+ channel activation". J. Biol. Chem. 274 (18): 12383–90. doi:10.1074/jbc.274.18.12383. PMID 10212211.{{cite journal}}: CS1 maint: unflagged free DOI (link)

External links

• Jen, Joanna C (2009-09-08). Familial Hemiplegic Migraine. NBK1388. In Pagon RA, Bird TD, Dolan CR, et al., eds. (1993–). GeneReviews™ [Internet]. Seattle WA: University of Washington, Seattle. {{cite book}}: Check date values in: |year= (help)CS1 maint: year (link)
• Spacey, Sian (2011-12-08). Episodic Ataxia Type 2. NBK1501. In GeneReviews
• Gomez, Christopher M (2013-07-18). Spinocerebellar Ataxia Type 6. NBK1140. In GeneReviews

• CACNA1A+protein,+human at the U.S. National Library of Medicine Medical Subject Headings (MeSH)